| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3813 |
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| Symbol | |
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| ID | 8546206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 5236852 |
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| End bp | 5238780 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646388483 |
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| Product | ABC transporter related protein |
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| Protein accession | YP_003268206 |
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| Protein GI | 262196997 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.206928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.202717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAGC GCGACGCCAA GCACGCGGCC AAGGCGCCGA GCGGCAAGCA GCCGGCCGGC
ACGGGTCAGG GCATGCGCCA GGAGCAGGTG CTCGGCAAGG CCTACGACGT CAAGCTGATG
GCGCGGCTGT GGACCTTCGT GGCCCCGCAC TGGCGGCTGC TCGGTATCTC GCTGCTGCTG
GTGCTGATCA CGCCCGCCTT CGAGCTGGCC CAGCCCTACC TGCTCGGCGT CGCGGTCGAC
GAATTCATCA AAGTCGACCG CCAGGACGGA ATCGGCTACC TGGTGCTCGG CTACCTCGGC
CTGGTGCTGC TCCAGGCCAC GGCCTCCTTC GCCCAGCTCT ACGTGCTCCA GCTCCTCGGT
CAGCGCTCCA TGCACGACCT GCGCGTGGCC ATCTATCGCC ACGTGCTGTC GCTGCGCACC
GCGTTCTTCG ACCGCATGCC CGTGGGCCGG CTGCTCACGC GCATGACCAA CGACGTCGAG
AACATCAACG AGATGTTCGC CAACGGCGTG GTCACCCTGC TGGCCGACTT CATCAAGCTG
ATCGCGATCG TGGTCGTGAT GCTGTCGATC AACGTCAAGC TCACGCTCAT GACCTTCCTG
ACCGTGCCCT TGCTGGTCCT GGTGGTCAAT TACGCGCGCA TCCTCATGCG CAACTCGTTC
CGCGAGATCC GGGTCAAGCT GGCCGCGCTC AACGCCTTCG CCCAGGAGCA TCTGTCCGGC
ATCAAGGTCG TCCAGCTCTT CGCCCGCGAG CAGCAGGCCA CCGACGACTA CGGCGAGATC
AACGCCGCCC ACCGCGACGC CTACCTCGAC GCCATCCGCG CCGACGCGGT GATGTACGCC
TTTGTCGAGG CCATCGGCGT GGTCTCGATC GCGCTCATCA CCTGGTACGC CAGCGGCGCC
GAGGACCCGC CCACCATCGG CGTGGTGGTC GCGTTCATCG AGTACGTGCG CAAGTTCTTC
ATCCCCATCC GCGACTTCTC GGCCAAGTAC ACGGTCATGC AGTCGGCCAT GGCCGCCAGC
GAGCGCATCA TGGCGCTGCT CGACACCGAC GAGCCCGACG CGCCCGAGCG CGCCGAGTAC
CGCGCCGCCG CCGACTCGCA GAAGCCCGCC GAGACCGAGC CCGCGAGCGG CGACGGCCGC
CCGCCCGCGC TCGCCATCGC CGATCTCAGC TTCGCCTACC GGCCCGGCGA GGAGGTGCTG
CGCGACATCG ACTTCGCCAT CCCGCGCGGC GCCCACATCG CCGTGGTCGG CGCCAGCGGC
TCGGGCAAAT CGACGATCAT CAAGCTCCTC GCCCGGCTGT ACGAAATCGA GCGCGGGCGC
ATTGAACTCG ACGGCCGCGA CATCCGCGCG CTGTCCAGCA GCGAGCTGCG CCGCCGGGTC
ACCGTGGTGT CTCAAGACGT GTTCCTGTTT GCCGGCACGG TGGGCGAAAA CATCCGCCTG
GGCCGCGCCG ACGCCACCGA CGACGAGCTG CGCGCCGCCC TCGAGCGGGT CGGCGCCGAC
CGCGTGCTGC TGCGCCGGGT GCGCGCCGAC GCCGGCGACA GCGCCACCCG CGGCCGCGCC
AGCGCCGACG AGGCCGACGC CATGCTGGCG CTCGAGGTGG CCGAGCGCGG TGGCAACTTC
TCGGCCGGAG AGCGCCAGCT CATCGCGTTT GCGCGCGCCC TGGTGCGCGA TCCCGACGTC
CTGGTGCTCG ACGAGGCCAC CGCCCACGTC GACCCCGAGG CCGAGGCTCT CATCGAGAAC
GGCGTGGCCG AGCTCATGCG CGATCGCACC ACATTGGTCA TCGCGCACCG GCTCTCGACC
ATCCGTCACG CCGATCAAAT TCTGGTCATG AGTCGAGGTT CGATCGTCGA GCGCGGTTCT
CACGATGAGC TGATCGCGCG CGGGGGCGTG TACGCCAAAT TAGAGCGCAC CTTCTCCCGC
AAGGATTGA
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| Protein sequence | MSERDAKHAA KAPSGKQPAG TGQGMRQEQV LGKAYDVKLM ARLWTFVAPH WRLLGISLLL
VLITPAFELA QPYLLGVAVD EFIKVDRQDG IGYLVLGYLG LVLLQATASF AQLYVLQLLG
QRSMHDLRVA IYRHVLSLRT AFFDRMPVGR LLTRMTNDVE NINEMFANGV VTLLADFIKL
IAIVVVMLSI NVKLTLMTFL TVPLLVLVVN YARILMRNSF REIRVKLAAL NAFAQEHLSG
IKVVQLFARE QQATDDYGEI NAAHRDAYLD AIRADAVMYA FVEAIGVVSI ALITWYASGA
EDPPTIGVVV AFIEYVRKFF IPIRDFSAKY TVMQSAMAAS ERIMALLDTD EPDAPERAEY
RAAADSQKPA ETEPASGDGR PPALAIADLS FAYRPGEEVL RDIDFAIPRG AHIAVVGASG
SGKSTIIKLL ARLYEIERGR IELDGRDIRA LSSSELRRRV TVVSQDVFLF AGTVGENIRL
GRADATDDEL RAALERVGAD RVLLRRVRAD AGDSATRGRA SADEADAMLA LEVAERGGNF
SAGERQLIAF ARALVRDPDV LVLDEATAHV DPEAEALIEN GVAELMRDRT TLVIAHRLST
IRHADQILVM SRGSIVERGS HDELIARGGV YAKLERTFSR KD
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