Gene Hoch_3806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3806 
Symbol 
ID8546199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5225417 
End bp5228140 
Gene Length2724 bp 
Protein Length907 aa 
Translation table11 
GC content73% 
IMG OID646388476 
ProductPhosphoenolpyruvate carboxylase 
Protein accessionYP_003268199 
Protein GI262196990 
COG category[C] Energy production and conversion 
COG ID[COG2352] Phosphoenolpyruvate carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.589788 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.171928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCG AAACGATTTC CATGGACCGC CTCGATGCCG ACGTCGCCCT GCTCAACGAG 
CGCCTCGACG CCGTGATCGC CGAGATCGCG GGCGACGACG CCCTGGCCCT GGTGCAGGGC
CTGGTGGGCG AGGCCATCGC CATGCGCGAG GGCACGCTCG AGGGCGGCCG CGACGCCTTC
GCCGCCCGCA TGCAGGCCTT CGATCTCGAC GAGCTGGCCC TGATCGCGCG CGTGTTCACG
CTCTGGTTCC ATCTGGTCAA CGCCGCCGAG GAGCAGCACC GCACCCGCGT GCTGCGCGCC
CGCGACACCG CCGAGAGCGC GCCCGATGGC TCGCTGGCCG CGGCCGCGCG CGAGCTGGCC
CAGTCCAGCG CCGACCCCGA GGAGCTGCGC GCGCTGCTCG GCCGGCTGTT CATCATGCCG
GTGCTCACCG CGCACCCGAC CGAGGCGCGC CGGCGCACGG TGCTCGAACA TCTCGGCGTC
ATCGCCTCGG TGCTCGACGA GCTCGACCGC GCCACCCTCG GCAACCGCGA GCGCCAGCAC
CTGATCGACT CGCTGCACGG CGCCATCCTG TCGCTGTTCG GCACCGAGGA GGCGCGCGCG
GTCAAGCCGA CGCCGCGCGA CGAGGTCGCC AGCGGTCTCG ACGTGTTCCG CGCCACGCTG
CTCGACGTCA CTCCGGGCAT GTACCGCACC TTCGAAGAGG CGCTGGCGGC CGCGTTCCCG
GGCCAATCGC TCGACGTGCC CTCGTTCATG CGCTGGGGCA CCTGGATCGG CGGCGACCGC
GACGGCAACC CCTTCGTCAC CTCGGACACC ACCCGCTGGG TGCTCGAGCA GCAGCGGGTG
TGCGTGCTCA AGCGCTACCT GCGCGACGCC GAGGACCTGA TGCGCGAGCT GTCGGTGTCG
GCCCGCCGGG TCAAGGATCC GGGCGGCCTG GCCGCGCTCG AGGCGTCGCT GGCCCCGAAC
CGCGAGAGCC TGCCCGAGGT CATGGCCAAG GCCCAGCGCT ACGCCACCCA CGAGCCCTGG
CGCGAGAAGG TCTGGTACAT CCGCCGCCGC CTCGAGGACA CGCTCACGCG CGGCGACGCG
GCCTACGCCC GCGCCGAGGA CTACCTCGAC GACCTGCGCG TGCTGCGCGA CACCCTGCAG
GACTGCGGCT TCGCGCGCCT GGCCGAGGGC TCGCTGCACG ACGCCATCCG CCGCGCCGAG
GTCTTCGGCT TCCACCTCGC CAGCCTCGAC CTGCGCCAGC ACTCGGCCGT GCACGAGCGC
GCCGTGGCCG AGCTTCTGCG CCACAGCGGC AAGGACGGCT ACGAGCAGAT GGACGAGGAC
GCCCGCGTGG CGCTGCTCAC CGAGCTGCTC GACCACGCCG ACTTCGAGCC GTCCGCGCGT
CCGGCCAAGC TCTCGGCCGA GACCCGCGAG ATCCTGGCCA CGCTCGACAT GGTCGGGCGC
GCGCGCCGCG AGCAGGGGCC GCGCGCGTGC GAGCGCTACA TCGTGAGCTT CACCAGCCAG
CCCAGCGACC TGCTCGAGGT GCTGTTTCTG CAGCGCGCCG CGCACCTGGC GCCGGGCGAG
CTGCGGCCGG TGCCGCTGCT CGAGCAGCTC GAGGATCTCG ATCACGCCGA CGTCATGGCC
GACGCCATGC TCACGGTGCG GCCCATCCGC GCGGCCCTGC GCGGCGAGCT CGAGGTCATG
ATCGGCTACT CCGACGCCGG CAAGCAGATC GGCTACTTCG CCGCCGCCGT GGCCCTGCGC
CGGGCCCAGC TCACCCTGGC CCGGGCGGCC GACAAGCACG GCGTGCCGCT GACCATCTTC
CACGGTCGCG GCGGCACCAT CGGCCGCGGC GGCGGGCCCG CCAACCAGAC CATCCGCGCC
CAGCCCTCGC AGGCGCTGCG CGGCCGCATC CGCGTGACCG AGCAGGGCGA GACCATCACC
GCCCGCTACG GCCGCAGCGA GATCGCCAGC CGCGACCTCG AGCAGATGGT CCACGCCGTG
CTCGTGGCCA CGGCCGACGA GAAGCGCGAG CGCCTGCCGG GCGCCGAGCT CGAGGCCCGC
AACGAGCTGT TCGACGCCGC CGGTGACGCC GCGCGCGAGG CCTACGGCGG CCTGCTCGCC
GATCCCGACC TGCTGGCCCG CTACGCGGTC GCGGCCACGC CCATTCAGCA GGTGACCAAG
CTGCCCATCG GCTCGCGTCC GGCCTCGCGC CGGCCCGGGC TGTCGTTCGA CGACCTGCGC
GCCATCCCCT GGGTGTTCTC GTGGAACCAG AGCCGCCACG GCCTGCCGGG CTGGTTCGGC
CTGGGCACCG CGCTCGGCTT CATCATCGAG CGCAAGGGCC TCGACTACGC CCGCTCGCTG
TACCGCGAGT CGCCGTTCTT CCGCGCGCTC ATCAACAACG CGCAGCTCGC GCTCAGCCGC
TCGGATATCG ATGTGGCCCG CTGCTACGCG GCGCTCGCCG ACGAGGACGC GCGCCAGATC
TTCGCGCGCA TCGAGGCCGA GTACGCGCGC ACGCTCGAGC ACGTGCTCGA GGTGGTCGAG
CGCCAGGAGC TGCTGGGCAA CCGGCCGCAC CTGGTCGGCA CCATCAAGCG CCGCAACCCC
TTCGTCGACG TGCTCAGCCA CGCCCAGATC GAGCTGCTCC AGCGGCTGCG GCGCAGCGAG
GACGAGGACG AGCGCGAGCG CCTGCTGGCG ATCCTGTTCA TCACCATCAA CGGCATCGCG
GCGGGTCTGC AGACCGCGGG ATGA
 
Protein sequence
MTAETISMDR LDADVALLNE RLDAVIAEIA GDDALALVQG LVGEAIAMRE GTLEGGRDAF 
AARMQAFDLD ELALIARVFT LWFHLVNAAE EQHRTRVLRA RDTAESAPDG SLAAAARELA
QSSADPEELR ALLGRLFIMP VLTAHPTEAR RRTVLEHLGV IASVLDELDR ATLGNRERQH
LIDSLHGAIL SLFGTEEARA VKPTPRDEVA SGLDVFRATL LDVTPGMYRT FEEALAAAFP
GQSLDVPSFM RWGTWIGGDR DGNPFVTSDT TRWVLEQQRV CVLKRYLRDA EDLMRELSVS
ARRVKDPGGL AALEASLAPN RESLPEVMAK AQRYATHEPW REKVWYIRRR LEDTLTRGDA
AYARAEDYLD DLRVLRDTLQ DCGFARLAEG SLHDAIRRAE VFGFHLASLD LRQHSAVHER
AVAELLRHSG KDGYEQMDED ARVALLTELL DHADFEPSAR PAKLSAETRE ILATLDMVGR
ARREQGPRAC ERYIVSFTSQ PSDLLEVLFL QRAAHLAPGE LRPVPLLEQL EDLDHADVMA
DAMLTVRPIR AALRGELEVM IGYSDAGKQI GYFAAAVALR RAQLTLARAA DKHGVPLTIF
HGRGGTIGRG GGPANQTIRA QPSQALRGRI RVTEQGETIT ARYGRSEIAS RDLEQMVHAV
LVATADEKRE RLPGAELEAR NELFDAAGDA AREAYGGLLA DPDLLARYAV AATPIQQVTK
LPIGSRPASR RPGLSFDDLR AIPWVFSWNQ SRHGLPGWFG LGTALGFIIE RKGLDYARSL
YRESPFFRAL INNAQLALSR SDIDVARCYA ALADEDARQI FARIEAEYAR TLEHVLEVVE
RQELLGNRPH LVGTIKRRNP FVDVLSHAQI ELLQRLRRSE DEDERERLLA ILFITINGIA
AGLQTAG