Gene Hoch_3779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3779 
Symbol 
ID8546172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5190825 
End bp5191607 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content70% 
IMG OID646388449 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_003268172 
Protein GI262196963 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.834377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.388082 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTATC AGCACATCCG AGTCGAGACC AAGGAGCACT ACGCGCTCCT CACCATCGAC 
CGTCCCAAGG CGCTCAACGC GCTGTCGAGC GTGGTGCTCT CCGAGCTGAT CACGGCGATC
AGCGAGATCG AGCTCGACGA CGCGGTCCGC GTCGTGATCA TCACCGGCGC GGGCGAGAAG
TCGTTCGTGG CCGGCGCCGA CATCGCCGAG ATGCAGGACC TGGGTCCGCA CCACGCGGAG
GCCCTGGCCG AGCTCGGCGG CACCCTGGCG GCGTCGATCG AGAACGCGGC CACGCCGTAC
ATCGCGGCGG TCAACGGCTT CGCCCTGGGC GGCGGGCTGG AGCTGGCGCT GGCCTGCGAT
TTCATCTACG CGGCCGACAC CGCCAAGCTG GGCCTGCCCG AGGTGACGCT GGGCGTGATC
CCGGGCTTCG GCGGCACCCA GCGGCTGCCG CGCCGGGTGG GCGTGGCCAA GGCCAAGGAG
ATGATCTTCA CCGGCGCCCG CATCGGCGCC GAGGAGGCGC TGCGCATCGG CCTGGTCGAC
GCGGTGTATC CGCTGGCCGA GCTGCTCGAG GCGGCGGGCA AGACCGCGGC GCGCATCGCG
GCCAACGGTC CGCTGGCCGT GGCCCAGGCC AAGAAGCTGG TGCACGTGGG CCAGTCGATG
AGCCTCGAGA GCGCCGCGAT GCTCGAGCAG CGCACCTTCG CGGGCCTGTT CGACACCGAG
GACCAAAAAG AGGGCATGCG CGCCTTTCTC GACAAGCGCA AGGCCGACTT CCGCGGCGTC
TGA
 
Protein sequence
MDYQHIRVET KEHYALLTID RPKALNALSS VVLSELITAI SEIELDDAVR VVIITGAGEK 
SFVAGADIAE MQDLGPHHAE ALAELGGTLA ASIENAATPY IAAVNGFALG GGLELALACD
FIYAADTAKL GLPEVTLGVI PGFGGTQRLP RRVGVAKAKE MIFTGARIGA EEALRIGLVD
AVYPLAELLE AAGKTAARIA ANGPLAVAQA KKLVHVGQSM SLESAAMLEQ RTFAGLFDTE
DQKEGMRAFL DKRKADFRGV