| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3778 |
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| Symbol | |
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| ID | 8546171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5189635 |
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| End bp | 5190783 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646388448 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_003268171 |
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| Protein GI | 262196962 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.341587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.271407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGTTCG AACTCTCCGA AGAGCAGAAG ATGCTCCAGA CCATGGCCCG GGACTTCGCC
CAGAAAGAGG TGTTGCCCAA GGCCGCCGAG ATCGACCGCG AACACCGCCA CCCCAAGGAG
CTGGTGGCGC GCATGGCCGA GCTCGGGCTG ATGGGCGTGG CCGTCCCCGA GGAGCTGGGC
GGCTCGGGCA TGGACAACGT GAGCTACGCG CTGGCGATGG AGGAGATCAG CCGCGCCTGC
GCGTCCACGG GCGTGATCAT GAGCGTCAAC AACTCGCTGG TCTGCGACCC GATCATGCGC
TTTGGCGACG ACGCGCAGAA GCGCGCGTTT CTGGCGCCGC TGGCCTCGGG CGAGAAGCTC
GGCTGCTTCG CGCTGAGCGA GCCCGAAGCC GGCTCGGACG CGGCCGCGCA GCGCACCACG
GCGGTGCGCG ATGGCGACGA GTGGGTGATC CAGGGGACCA AGAACTGGAT CACCAACGGC
CCGGTCGCCG ACACCATGGT GCTGTTCGCG ATGACCGACA AGGAGCAGGG TCACCGCGGC
ATCTCGAGCT TCATCGTGCC CATGGACACG GCCGGCGTGC GCTGCGGCGA GCCCGACGAC
AAGCTCGGCA TCCGCGGCTC GAAGTCGTCG CAGGTGTTCC TCGATGACGC CCGGCTGCCG
GCGAGCGCGC TGCTCGGCGA GGTCGGCGGC GGCTTCAAGG TGGCCATGAG CACGCTCGAC
GGCGGCCGCA TCGGCATCGC CGGGCAGGCG CTGGGCATCG CGCGCGCCGC GCTCGAGGAC
GCGCTCGACT ACTCCCTGAA CCGCAAGACC ATGGGCAAGC CGATCGCCAA GCACCAGGCC
ATCAGCTTCA AGCTGGCCGA CATGGCCACC GAGCTCGACG CGGCCCGGCT GCTCACGCTG
CGCGCCGCGT ATCTCAAGGA CAGCGGACAG CCGTACGGAA AAGCCGCGGC CATGGCCAAG
CTGTACGCCT CGGACGTGGC CAACCGGGCC GCGCGCGAGG CTATCCAGAT CTTCGGCGGC
AACGGCTACG TGACCGAGTA CCCGGTGGAG CGCCACTTCC GCGACGCCAA GATCACCGAG
ATCTACGAGG GCACCAGCGA GATCCAGCGC CTGGTCATCG CCAACCATCT GTTCAAGGAG
CACGCATGA
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| Protein sequence | MKFELSEEQK MLQTMARDFA QKEVLPKAAE IDREHRHPKE LVARMAELGL MGVAVPEELG
GSGMDNVSYA LAMEEISRAC ASTGVIMSVN NSLVCDPIMR FGDDAQKRAF LAPLASGEKL
GCFALSEPEA GSDAAAQRTT AVRDGDEWVI QGTKNWITNG PVADTMVLFA MTDKEQGHRG
ISSFIVPMDT AGVRCGEPDD KLGIRGSKSS QVFLDDARLP ASALLGEVGG GFKVAMSTLD
GGRIGIAGQA LGIARAALED ALDYSLNRKT MGKPIAKHQA ISFKLADMAT ELDAARLLTL
RAAYLKDSGQ PYGKAAAMAK LYASDVANRA AREAIQIFGG NGYVTEYPVE RHFRDAKITE
IYEGTSEIQR LVIANHLFKE HA
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