Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3762 |
Symbol | |
ID | 8546155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 5168740 |
End bp | 5172318 |
Gene Length | 3579 bp |
Protein Length | 1192 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 646388432 |
Product | serine/threonine protein kinase |
Protein accession | YP_003268155 |
Protein GI | 262196946 |
COG category | [R] General function prediction only |
COG ID | [COG3899] Predicted ATPase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00167797 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.557916 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGTTCA CGGGGACATC GCGCTTCCAA ATTCTCGACA AGTTGGGCGA GGGCGGCATG GGCGTTGTCT ACGACGTCTA CGACCGCGAG CGCGGCATGC GGGTGGCGCT CAAGTATCTG CGGCGGGTCA ACGACAGCAT GGGGCTGTAC CGCTTCAAGC GCGAGTTCCG CGCGCTGAGC AACCTCAGCC ACCCCAACAT CATCACGCTC TACGAGCTCA TCTCGGTGGG GGAGGAGTGG TACTTCACGA TGGAGCTCAT CGAGGGCGTG GACGTGCTGC ACTACGTGCG CACCGAGCGC AGCGGCGAGC TCGAGTACGG CGAGACCGTG ACCGGCGCCA GCCTGCTCGA CACCGCCACG CAGATCGAGC TCAACGTGGG CGCCTCGTCA GCGCTGTCGC GGCCCCGGGG CGAACGCGTG CGCGCGCCCT CGCCGACGCC GACCTCGTCG CTGAGCACGA CCACCACGCG CATCACCGAG GGGCTGGCGC TGCCGCCGAT ACCGGCGCGC CGCACGCCGA TTTCGGACAT CGTGTCGCTC GATCGCATGC GCGACGCGTT GGCGCAGCTC GCCAGCGCGC TCGACGCGCT GCACGCGGCC GACATGATCC ATCGCGACCT CAAGCCGGCC AACGTGCGCG TCACGCGCGA GGGCCGGGTG GTGCTCATGG ATTTCGGCGT GGTGGTCGAA ATGCAGCAGC CGCACTCGCT CGAGCGCAAG GGCTCGGCCG TGGGCACCCC GGCGTTCATG GCGCCGGAGC AGAGCGGCGA TGACGGGCGG CCGACGGCCG CGGTCGACTG GTACGCGTTC GGCGTGCTGC TGTACCTGGC GATGACCCAG CGGCTGCCCT TCGAGGGCAC GGTGATGCAG GTGCTCGACA CCAAGCGCTC GCACGATCCG CTGCCGCCGC GGGTGTTCAC CGAGGGCGTG CCGCCCGACC TCGAGCGGCT GTGCATGGCG CTGCTCGATC GCGATCCCGC GCGCCGTCCC GGCGGCGCCG AGGTGCTCGA CCGCCTGGGC CGCGGCGGTC CGCGCAAGGT GCCGAGCCTG GTCGAGCCGA CCCTGGATCT CGGCGGCCGG CCCTTCGTCG GCCGCGCGCG CGAGCTGGGC GAGCTGCGCC GGAGCTTCGA CGAAGCCTGC GAGCAGGGCG GCGGCTGCGT GATCGTCGCC GGGCCCTCGG GTATCGGCAA GAGCAGCCTG GTCGAGCGCT TTCTGCGCGA GCTGCGCATC CGCCGCATGG CCGATGACGC GCCCGCGCAG ACGTCGCGCA CGACGCCCGT GCCGCTGATT CTCTCGGGGC GCTGTCACGA GCGCGAGACG CTGCCGTTCA AGGCCTTTGA CGGCGTCATC GACGCCCTGG TGGGCGCGCT CATCCAGCTC TCCGAGGAGC GCCGCGCCGA GCTCCTGCCC GAGGATCTGC GGCTGCTCGA GCGCATGTTC CCGGTGCTGC GGCGGCTGTC GAACAGCGAG GCGCAGCGCC GCGCCGACCC GCCGCCGCTG GAGATGCGCG GGCGCGCCTT CCAGGCGCTG CGCGCGCTGC TGGCGAGCCT GGCCGCGACC CGTCCGGTGG TGGTGCAGAT CGAGGATCTG CAGTGGGCCG ACGAGGAGAG CCTCAAGCTG ATGCGCGCGC TGCTGACGCC GCCGGTGCCG GTGGGGCTGC TGGTGCTGAC CACCATCCGC TCGCGGCCGG CGTCGGCCGA GGACCAGGAC GAGGGCATGG GCCGCGTGCT CTCGGCCAGC GATATCGAGG CCGAGCTCGG CGCCGAGGTG TGCCGCAGCA TCGCGTTGCC GCCGCTCACG GCCGAGGAGC AGCGCGCGCT GGTGTCGCGC CTGGGTCGCG GGGTGTCGCC GGCGGCCGAG TTCTGGGACC AGGCCATGGG CCATCCGATG CTGCTGGTCG AGCTGGCGCG CATGGCCGAG GAGACGCCCG GCGTCGCCGA GCACGGCGGG GCGCTGCGGC TCGAGGACAT CCTGCACGAG CGCGTGCAGC GCATGCCGGC GCAGGCGCGC GCGCTGCTCG AGGCCGTGGC CGTGGCCGGC ACGCCGACGC CGCTGCGGGT GCTGGGGGTC GCGGCCGAGC TGTCGAGTTC GGACACCGAG CGCGCGGTCG CCCTGCTGCG CATCGGGCAA TTCGTCCACA CGTACCAAAG CGGGCTGGAG CCGTGGATCG GCGCCTATCA CGACAAGATC CGCGAGGCGC TGGTGAGCCG CGCCGAGGCC GAGCACACGG CGGCCCTGCA CCGCCGCCTG GCCGAGGCTC TCGAGGACTG GAGGCAGGCT CCGCCCGGCC TCTTGGCGCG GCACTGGCAC GCGGCGGGCG AGGTCCAGCG GGCGGCCGAG TGTGCGCTCG AGGCCGCACG CCAGGCCGCG CACACGCTGG CCTTCGAGCG CGCGTCGGCG TTCTACCGGC AGGTCGTCGA GTATCTGGCC GACAGCGCCG ACGGCGAGGC CACGAGCGCG CTGCGCTGCC GCGCCTGGCT GGGTCTGGCC GAGGATCTGC GGGTTCTCGA CCGCACGGAC GAAGCCCTTG CGCTGCTCGA GCGGGTCGAG TCCGAGGCGC AGAACTACGA GCTCACCAGC GAGCTGGCCG CGCTGTACTA CATGCGCGGC AATCTGCTGT TTCCGCGCGG CGATCTCGAC GGCTGCATGG CCGCGCACGC CCAGGCCCGG GTCATGGCCA AGCGCGCCGG CTCGCCCGAG CGCGAGGCTC AGGCACTCAG CGGTCTCGGC GACGCCTACT ACATCCGCGG CGAGATGCGC GCCGCGCACG AGTACTTCGA CGCCTGCATC GCCCTGTGTC GCGCGCACGG CTTCGTCGAG ATCGAGGTCG CGAACCTGGC CATGCGCGGC ATCACCCGCT ACTACGACCA GAACGATCTC AGCTCGGCGC TGCGCGACGG TATGGACGCG GTGACCGCGG CGGCGTGGAT CGGCCACACG CGCGCCGAGA TCGTCGCCCG CAATGGCTGC GTGGGCTGGT TCCTCACCGA GATGGGGCGC TTCGAGGAGG CCACGCGCGA GTTCGAGACC GCTCGGGCCG CAGCGCGGCG TCTGGGCGCG CGCCGCTTCG AGCCCAACTC GCTCAACTGG CTGGCCAAGA TCGCCTACCT GCAGGGGCGC CGCGACGAGG CGGCCGAGCT GGCCCAGCGC AGCCTGGCCG TGTGCCGGGA GACCAGCTTC GCCTTCGTCG GGCCGATGGC GCTGGCGGTG GTGGCGCTCA CGAGCCGCGA CGAGCAGACG CGCCTCGAGG CCCTCGCCGA GGGCGAACGC ATCCTCGCTC AGGGCAGCGC CAGCCACAAT TACCTGTACT TCTATCGCGA CGGCATCGAC GCGCTGCTGG CGGCCGGCGA CTTCGAGCGC GCGCTGCGCT ACGCCGACGC GCTCGAAGCC TATCCCGGCG GCGAGGTGAT GAAGTGGTGC CGCTTCTTCG CCCAGCGCGC GCGCCTGCTG TGTGCGGCGG GCCAGGGCGA GCTGAGCGAG GAGCTGCGCG AGGAGCTGTC GCGGCTGCGC ACTCAGGCAC GCGTGATCGG CCTGTTCACG GCCGCGCGCG CGCTCGACGA GGCCCTGCGC GACGCCTGA
|
Protein sequence | MPFTGTSRFQ ILDKLGEGGM GVVYDVYDRE RGMRVALKYL RRVNDSMGLY RFKREFRALS NLSHPNIITL YELISVGEEW YFTMELIEGV DVLHYVRTER SGELEYGETV TGASLLDTAT QIELNVGASS ALSRPRGERV RAPSPTPTSS LSTTTTRITE GLALPPIPAR RTPISDIVSL DRMRDALAQL ASALDALHAA DMIHRDLKPA NVRVTREGRV VLMDFGVVVE MQQPHSLERK GSAVGTPAFM APEQSGDDGR PTAAVDWYAF GVLLYLAMTQ RLPFEGTVMQ VLDTKRSHDP LPPRVFTEGV PPDLERLCMA LLDRDPARRP GGAEVLDRLG RGGPRKVPSL VEPTLDLGGR PFVGRARELG ELRRSFDEAC EQGGGCVIVA GPSGIGKSSL VERFLRELRI RRMADDAPAQ TSRTTPVPLI LSGRCHERET LPFKAFDGVI DALVGALIQL SEERRAELLP EDLRLLERMF PVLRRLSNSE AQRRADPPPL EMRGRAFQAL RALLASLAAT RPVVVQIEDL QWADEESLKL MRALLTPPVP VGLLVLTTIR SRPASAEDQD EGMGRVLSAS DIEAELGAEV CRSIALPPLT AEEQRALVSR LGRGVSPAAE FWDQAMGHPM LLVELARMAE ETPGVAEHGG ALRLEDILHE RVQRMPAQAR ALLEAVAVAG TPTPLRVLGV AAELSSSDTE RAVALLRIGQ FVHTYQSGLE PWIGAYHDKI REALVSRAEA EHTAALHRRL AEALEDWRQA PPGLLARHWH AAGEVQRAAE CALEAARQAA HTLAFERASA FYRQVVEYLA DSADGEATSA LRCRAWLGLA EDLRVLDRTD EALALLERVE SEAQNYELTS ELAALYYMRG NLLFPRGDLD GCMAAHAQAR VMAKRAGSPE REAQALSGLG DAYYIRGEMR AAHEYFDACI ALCRAHGFVE IEVANLAMRG ITRYYDQNDL SSALRDGMDA VTAAAWIGHT RAEIVARNGC VGWFLTEMGR FEEATREFET ARAAARRLGA RRFEPNSLNW LAKIAYLQGR RDEAAELAQR SLAVCRETSF AFVGPMALAV VALTSRDEQT RLEALAEGER ILAQGSASHN YLYFYRDGID ALLAAGDFER ALRYADALEA YPGGEVMKWC RFFAQRARLL CAAGQGELSE ELREELSRLR TQARVIGLFT AARALDEALR DA
|
| |