Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3676 |
Symbol | |
ID | 8546066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 5055382 |
End bp | 5058042 |
Gene Length | 2661 bp |
Protein Length | 886 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 646388344 |
Product | HEAT domain containing protein |
Protein accession | YP_003268070 |
Protein GI | 262196861 |
COG category | [C] Energy production and conversion |
COG ID | [COG1413] FOG: HEAT repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000145397 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGCAACC AGACTGCCCG GCGCCGGGCT GGCATCGGCG GCTCGCTGGC GTTCGCGCTG GCGACCGCGC TCGCCGCGCT GCCCGCGCCC TGCCCGGCTC AGGCCTCGGA GTTCGACTTC GCCTGGGTGG GCAAGATCGA GCTCGAGGCC GAGGGCCTGT CGTCGCCCGA ACACAAGGAG CGGCGCAAAG CCGTGGCCGC GCTGGCCACC TACGACATCA CGCTCACCAA GCCGCATCTG CTGCGCGCGC TGGGCGACAG CGACCGCGGC GTGCGCCACG AGGCCGGCCG CGTGCTGGCG CGGCACGGCC TGGCCGAGAT CACGCCGGCC ATCGTGTCCT GGCTCGAGCA GTCCGACAGC GAGGTCAAAA AGGACGCGGT CGAGATCCTC GGCCTGCTCG GCAACGAGCG CGCGGTGAGC GCGCTGGTGC GCACCCTGGG CGATGTCGAT GAGCAGGTGC GCAAGAAGAC CATCGAGGCC CTGGGCGAGG TCGGCAATCC CCAGGTGGTC GTGCCCTTGA TCGGACGGCT GGACGACGAC CGCTTCGAGG TCCGCCGGGC CGCGGTCGAG ACCCTGGAGA AGCTCGGCGA TGCGCGCGCC GTCATCCCGC TGGTGGGCGC GTTCGACGAC ACCTCCAACG CGGTGCGCGC GGCGGCCGTG CGCGCGGTCG GCCGGCTCGG CGACCCGGCG GCGACGCCGG CGCTGCTGCG GCTGCTCGGC GACCAGGACG ACGACATCCG CCGCGCCGCC GTGGCCGCGC TCGGCAACCT GGGCGCGAGC GAGGCCATCG AGACGCTGAT CGCCGAGCTC GAGCGTCACC CGGCCGGCGT CTACCGCGCC GAGATCGCCC ACGCGCTCGG CAAGATCGCG GCCCGCGTTC GACGCGGCCA GCGCGAGCGC GGGGACGCCG CGCCAGGGCC TGAGGCGGCG CGGGAGGCGG CGCGCGAGCG CGGGGACGAG GCCGCGGAGC GAGCGGTGCA GGCGCTGGTG CGGGGGCTGG CCGAGCCGGC GCTGCGCGGC GCTGCGCGCG AGGGTCTGCG CGCGGCCGGC GCGATCGCGG TGCCGGCTCT GCTCGCGCAT CTGGCCGGCG AGCTGCCGGG CGATCCCGCC ACGGCGGTCG AGATCCTGGG CGAGATCGGC GAGGCCGCGG CGGTGCCGGC GCTGGTCGCC GAGCTCGAGC GCGCTCGCAT CAGCCGGCTG CTGGTGCTCG ACGCCCTGCG CGCGACCCGC GATCCGCGCG CGCTGCGGCC CATCCTCGGT CTGCTGTCGA GCGATGATAC GACCCTGCGC CTGCGCGCGA TGGAGGCGCT GCGCCCGATC GTGGCCGACA AGCGCGCGGC CGATATCCTG GTCGAGCTGC TCGACGACGG CCACCTCGAG ATCCGCATCC TGGCCGCCGA GTATCTCGGC ATCATGCGCT CGCGCGGGGC CGCGCCCGCG CTGCAGGCGC GCATCGCGCC CGAGCACGAC CCGCGCCTGC GCCTGGCCGC GCTCGACGCC CTGGCCGAGC TCGGTGAGCC CTCGGCGCAG CCCGCGTTTC TGGCGGTGCT CGCCAGCGGG CCGGGGTTTC TCCACGCCTC GGCGGCCAAC GGCCTCATCT ACCTGGCCAC CGCGGCGCCT GAGGGCGGCG CTCGCTCATC GCGGGCGGCA CCCGACGCCG CCCCGCGTTC GGCCTCGGGC GCGGCTGTCG ATGTCGCCGC CGTGCGCGCG CTCGCCGGCG ATGAGCGGAG CGCGGGTCGC GCCCAGGCGG TGCGCGCCCT GGGCGGGGTG CTGCGCGGCC GCGGCGATGA CGCCGCCCGC GAGCTGCTGC TGCGGCTGAG CCGCGAGCGC GATGTCGGCG TGGCGCTGGC CGCCATCGAG GCCCTGGGCG CGATGGGCGA TCGCGAGGCC GCGCCCGGGC TGCGCGGGCT GCTGCGCGCC GATCTGCACC GCCGCCGGGC GGCCGCGAGC GCGCTCGGCG ATCTCGGCGA TACCTCCGCG CGGGACGCCC TGCACGAGGC CCTCGGCGCT GGCGACGACC GCCTCAGCGG CGCGGCCGCG CTGGCGCTGA GCAAGCTGCC GGCGACGGCG AGCACGATCG CGGCGCTGGA GCGCGCCAGC CAGCGCCGCG GCTGGGCCGC CGTCATCAAC GCCAGCGCGG CGCTGGCCCG CCTGGCCCCG GCCGACCGCG CCGAGACCTT GCTCACCCTG GCCTATCACC GCGACCGCCT GGTGCGCGTC AACGCCGCGC TCGGCCTGGG CCGATTGCGC GCGCCGCAGG CGCTGGAGCC GCTGGGCAAA CGCCTGCGCG AGGACGAGAG CCCGCTGGTG CGCGAGGCCG CGGCGCGGGC GCTGAGCCAG TTTGCCGACG CGCTGTCCGA AGACGCGCGC GCGGCGCTGG CCCAGGCGCG CGAGCGCGAC ACCGACGCCG CGGTGCGCGC GGCGGCCGCG GCCGCGCTGG CGGCGCCCTT TGTCCCGCCG GCGCGCGACG ACTGGCGCAA CTTCGCCATC GTCGAGCCCC AGCACGACGG CCAGCCGGTG CGCCAGGCGG CGTATTTCGT CCAGGCGGCC GACGGCCTGG TGCAGGCCTA CTACAGCGAC GAGCGCGGCT ACCTGAGCGA GGAACAGACC GCGCCCGGCC GCCACCTGGT GGCCCCGCGC TCGCACGCGA CGCGCTACTG A
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Protein sequence | MRNQTARRRA GIGGSLAFAL ATALAALPAP CPAQASEFDF AWVGKIELEA EGLSSPEHKE RRKAVAALAT YDITLTKPHL LRALGDSDRG VRHEAGRVLA RHGLAEITPA IVSWLEQSDS EVKKDAVEIL GLLGNERAVS ALVRTLGDVD EQVRKKTIEA LGEVGNPQVV VPLIGRLDDD RFEVRRAAVE TLEKLGDARA VIPLVGAFDD TSNAVRAAAV RAVGRLGDPA ATPALLRLLG DQDDDIRRAA VAALGNLGAS EAIETLIAEL ERHPAGVYRA EIAHALGKIA ARVRRGQRER GDAAPGPEAA REAARERGDE AAERAVQALV RGLAEPALRG AAREGLRAAG AIAVPALLAH LAGELPGDPA TAVEILGEIG EAAAVPALVA ELERARISRL LVLDALRATR DPRALRPILG LLSSDDTTLR LRAMEALRPI VADKRAADIL VELLDDGHLE IRILAAEYLG IMRSRGAAPA LQARIAPEHD PRLRLAALDA LAELGEPSAQ PAFLAVLASG PGFLHASAAN GLIYLATAAP EGGARSSRAA PDAAPRSASG AAVDVAAVRA LAGDERSAGR AQAVRALGGV LRGRGDDAAR ELLLRLSRER DVGVALAAIE ALGAMGDREA APGLRGLLRA DLHRRRAAAS ALGDLGDTSA RDALHEALGA GDDRLSGAAA LALSKLPATA STIAALERAS QRRGWAAVIN ASAALARLAP ADRAETLLTL AYHRDRLVRV NAALGLGRLR APQALEPLGK RLREDESPLV REAAARALSQ FADALSEDAR AALAQARERD TDAAVRAAAA AALAAPFVPP ARDDWRNFAI VEPQHDGQPV RQAAYFVQAA DGLVQAYYSD ERGYLSEEQT APGRHLVAPR SHATRY
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