Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3653 |
Symbol | |
ID | 8546043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 5029063 |
End bp | 5030016 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 646388322 |
Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
Protein accession | YP_003268048 |
Protein GI | 262196839 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0107343 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGGCT CCGATACGCC CCGCCCGCCC CTGGTCGTGA TCGTGGGACC CACGGCCTCG GGCAAGAGCG ACGCCGCGCT GGCGCTGGCC GAGCGCGTCG GCGGCGAGGT GGTGTCCGCC GATTCGCAGC AGGTCTACAC CGGCATGGAC ATCGGCACCG GCAAGGTCTC GGCCGAGGTG CGCGCGCGCG TGCCCCATCA CCTCCTCGAC GTCATCAGCC CGGCCGAGGA GATGACGGCC GCGCGCTTCG TCGAATTGGC CGATCGCGTC ATCGCCGACG CGAGCGCGCG CGGGCGGCCC GTGATCGTGG CCGGCGGCAC CGGGCTGTAC GTGCGCGCCC TGCTCTTCGG CCTGTTCGAG GGGCCACCCG CGCAGCCCGC CCTGCGCGAG AGGCTGCGCG CCGAAGCCGA GGCCGGAGGT GGCGCGCCGG CGCTGTGGCA GCGACTCCGC GCGGTCGACG CCGCGGGCGC CGCGCGCATC GACCACAATG ATCTACGCCG AATCATCCGC GCGCTCGAGG TCTTCGAGAC CACGGGCGTG CCGATGAGCG TGCACCAGGC GCGTCACGAC TTCCGCACGC TCGAGCCGCG CTATCCCGTG CGCATGCTCG GTCTGGCGCC GGCGCGCGAG CAGCTCTATA AGCGCATCGA TACGCGGGTC GAGGCCATGG TCGAGGCCGG GCTGGTGGCC GAGGTCGAGG CGCTGCGCGC GGCCGGCATC GACCGCAGCT ATCGTTCGCA AGCCGCCATC GGCTACGCCG AGCTGCACGA GCACCTCGAC GGCGCGCTGC CGCTGGCCGA CGCGATCGCG CGGATCCAGC AGAACTCGCG CCGCTACGCG CGCAGGCAGC TATCCTGGTA TCGGCGCGAC CCCCGGGTGG CGTGGGCCAG CGACCTCTCG GTCATTGACC TTCCGGCGCT GGAGCGCTAC CTACGGTCGA GACCGCAGCG CTGA
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Protein sequence | MTGSDTPRPP LVVIVGPTAS GKSDAALALA ERVGGEVVSA DSQQVYTGMD IGTGKVSAEV RARVPHHLLD VISPAEEMTA ARFVELADRV IADASARGRP VIVAGGTGLY VRALLFGLFE GPPAQPALRE RLRAEAEAGG GAPALWQRLR AVDAAGAARI DHNDLRRIIR ALEVFETTGV PMSVHQARHD FRTLEPRYPV RMLGLAPARE QLYKRIDTRV EAMVEAGLVA EVEALRAAGI DRSYRSQAAI GYAELHEHLD GALPLADAIA RIQQNSRRYA RRQLSWYRRD PRVAWASDLS VIDLPALERY LRSRPQR
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