| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3632 |
|---|
| Symbol | |
|---|
| ID | 8546022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 4992683 |
|---|
| End bp | 4996705 |
|---|
| Gene Length | 4023 bp |
|---|
| Protein Length | 1340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 646388301 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_003268027 |
|---|
| Protein GI | 262196818 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00419397 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGCAG GTGACACGAT CGACCGCCGC TTCGAGGTCA CAGAGGAAGT CGCCGCGGGC
GGCATGGGGC GCATTTTTCG CGCCACGGAT CTGCAGACCG GCGAGCCGGT TGCGGTCAAG
GTGCTCGGCA ACAGCGACGC GCGCGCGGCC GAGCGCTTCC TGCACGAGGC CCGGGTCCTG
GCCGAGATCC GCCATCCCGG CATCGTGCGC TACGTGGCCC ACGGCATGCT CGACGTCGGC
GCGCCCTATC TGGTGATGGA GTGGCTCGGC GGCGAGAACC TGGCCGCCTA TCTGCGCCGC
GTCTACGGCT CGGAGCTCGG CGATCGCACG CTCGACGACA CCGTGCCGCC CAGCCTCAAC
GCGCCGCGCT TGCCGGTGAC CGAGGCGCTC ACCGTGGGCC GGCGCCTGGC CTCGGCCGTG
GCCGAGCTGC ACAAGCGCAA GCTCGTGCAC TGCGACATCA CGCCCAACAA CCTGGTGCTC
GCCGACGGCA CCATCGATCA CGTCAAGCTC ATCGACTTCG GCACCGTGCG CCACCGCGTG
CACGAGCCCG GCACCAGCGG CGACCTGATC GGCACGCCCT TCTACATGGC GCCCGAGCAG
GCGCGCTCCG AGGGCAAGCT GGGGCCGGCG ACCGACGTCT GGGCCATCGG CTGCGTGCTC
TACGAGTGCC TCACCGGCTA CAAGGCGTTC TGGGCTGACA ACATCATCGT CGTGCTCACG
CACATCCTCA TGGATGACCC GCTGCCGGTG CGCAAGCTGC GCCCCGAGCT GCCCGAGGCG
CTGGCCAGCA TCGTCATGCG CAGCCTGTCG AAGGCGGCCT CGGAGCGGCC GCCCGACGCC
GAGGCGCTGG CGCAACTGCT CGAGCACCTC GAGCGCAACC GCGGCGACAC CGACACCATC
CCGCGGGTCG CCGCCTGGCC CGACGGCAGC GCGCCGGTCA AGATGGCGCA GCAGCCGACG
CTCACGCGCG TCGAGCGCCG GGTGAGCTGC CTGTTGTTCG CGCGCCACGT CGCCCCCGGG
CCCAAGCCCT CGCGCGAACA GCTCGCCGCC GTGGTGGCGC CGCTCGGCGC CGAGCTCGAG
CGCCTGGCCG ATGGCTCGCT GCTGGTGAGC GTGCCCGGCA GCCGCACGCC GAGCGACCAG
GCCACGCACG CGGCCCGCGC CGCCCTGGCC CTGCGCGAGG CCGCGCCCGG GCTGGCCATG
AGCCTCACCA CCGGCCGGGT CGAGGGACCG CGGCAGATGC CGCCCATCCG CGTGCTCACC
CGCGCCGCGC GGGTGCTGCA GCGGCTGCCG GCGAGCGCCA TCCGCCTCGA CGAGGCCACG
GCGTCGCTGC TCGACGCCCG CTTCCACCTC AGCGCCGTGG CCGAGGGCGC CGATCTGCGC
GCCGAGCGCC CGTACGAGGC GCCGCGCACC CTGCTCGGCC GGCGCACGCG CTGGGTCGGC
CGGCAGCGCG AGCTGAGCAC CCTGCTGGCG ACCTTCCACG AGTGCGTCGA GGACGAGATC
GCGCGCGCCG TGCTGGTCAC GGCCGTGGCC GGCATGGGCA AGTCGCGGCT GTGCTACGAA
TTCGAACGCG CGGTCGAAGA CACCGAGATC GACTTCCTCA TGCTGCGCGG ACGCGGCGAC
GCGGTGGCCG CGGGCTCGCC CTTTGTGCTC CTGGCGCCGG CGCTGCGGCG GCTCTTCGAC
ATCCGCAGCG CGGCCGAGCC GGCCGAGCAG CAGGCCCAGC TCATCGCCCG GCTGGCCGAG
GTCATGCCGC TGCCCGCGGC CCAGCACCGG GTCGCGCCGC TGCTCGGCGA GCTGATGGAC
GTGCCCTTCC CGGTCGAGAG CAGCGACGCG CTGCGCGCGG CCCGCGCCGA CCCCATCCTG
CAGGGCCAGC TCATGCAGAG CGCGTGGCTC GAGTGGCTCA CGGCCGAGTG CGCGCGCCAG
CCGGTCATCC TGCTCATCGA GGACCTGCAC TGGGGCGACC TGCCCTCGGT GAACTACATC
GACGCGGCCC TGCGCAGCCT CTCGGACGCG CCGCTGCTGG TGCTGGCGCT CAGCCGCCCC
GAGGTGCACA CCGCCTTCCC CACGCTGTGG TCGCAGCGCG CGCTGTCCGA AATCCCGCTG
CATCCGCTGT CGCGACGCGC CAGCCAGGCG CTGGTGCGCG AGGCCCTGGG CGAGCGCGTG
AGCGACGAGG TGGTCCGGGC CGTGGTCCGG CGCGCGGGCG GCAACGCCTT CTATCTGGAA
GAGCTGATCC GCGCGGTCGC CGACGGCAAC CAACTGGGCG AGGCCGAGCT GCCCGACACC
ATCGTCGGCA TGGTGCAGAG CCGCCTCGAC GCCCTCGGCA GCGACGCCAA GCGGGTGCTG
CGCGCCGCCA GCGTGTTCGG CGAGGTGTTC TGGAAGACCG GCGTCGAGAC CTTGCTCGGC
GATGACGGCG TGTACGGCGT CGATGAGTGG CTGAGCGATC TCGTGGCCGG CGAGGTGCTG
GTCGGGCGCC CGGCCTCGCG CCTGGTCGGC GAAGAGGAGT ACGCGTTCTC GCACGCGCTG
ATGCGCGACG GCGCCTACGC CATGCTCACC GCCGAGGACC GCGAGCTCGG CCACCGCCTG
GCCGGCGACT GGCTCGAGCG CAGCGGCGAG CGCGACAACC TGGTGCTGGC CGAGCACTTC
GCGCGCGGCG GCGAGCCCGA GCGCGCCATC CCCCACTACC TGCGCGCGGC GGCGCAGGCG
CTCGAGAGCG GCGATCTCGA GGCCGCCGTG CAGCGCGCCG AGCAGGCCGC GGGCGCGGGC
GCGAGCGGTC GCGAGCTCGG CGCCCTGCGC TCGCTGCAGT CGGTGGCCAG CTACTGGCTG
AGCGACTACG TCACCAGCCA GCGCCACGGA CGCGAGGCCG TGGCCCTGCT CGCGGAGGGC
GGCGCCGAGT GGTTCGCGGC CATGGGCAGC GCCATCGTGT CGAGCGCGCG CCTGGGCGAA
CACGACGACG AGCTGAGCGC GCGCGCGGTG CGGGCCACGG CCGCGCCCGG CGCCGAGGCC
GCCCAGATCG TGTGCCTGTG CCGGGTGTCG TTTCAGCTCG TTTTTGCCGG ACGAATGTCC
GAAGCCTACC AGATCCTGGC GCGCATCGAC GCGCTGCTGG CCGCGGCTGA CGCCGGCGCC
GGCCGAGTCT CTGGTCCTGG GCGGGGCGAA TCCATCGGCG TCGGCGCCGG CATCGACGCC
ATCACCGCCG CCCATGTCTA TCATCTGCGC TCGTTCCACG CCGCCCAGGG CGGCTATCCC
GACGTGTTCT TGCCCAACCT CGAGGCCGCG GTGGCCGCGT TCGAGCGCGC CGGCGACATC
CGCAACGTCG AGCTCGAGCG CTCGACCATC GCCTGGGCGT GGTCGGAGAT CGGCTTTTTC
GACCACGCGG CCGAACTCGC TCGCAAGAAC CTGGCCGCGT GCATCGCCAG CGGCAACCAG
CAGGCGGCGA CCTACGCCAA GCTCAACCTC GGCCAGATCC TGGGCTACAT CGGCGGCAAC
GAGGACGAGG CCCGCCGGCT CATCGCCGAG GCCGCCGAGG AGTCGCGGGC GGTGTCCAAC
CCGCGCTCGG AGGGCTGGGC CAACGCGCTG GTCGCCACCC TCGACTACCG CGCCGGCGAC
CCGCTCGCGT CCGAGCGCCA CGCCGCCCGC GCGGTCGAGC TCCTGCGCGC GTCGCCGGGG
CTGCGCGTCT GGGGGCAGGC GCTGCACGCC CGCGCCCTGG TCGCGCTCGG ACGGGCTGCC
GAGGCGCTGC CCAAAGCCGA GGAGGCCATG GAGCATCTGC GGCGCTTTGG CGGGCTGCTC
CAGGGCAACG CGCTGCCGCC CCTGGTGCTG GCGAGCGCGC TCGACGCCAC CGGCCAGCCC
GATGCCGCGC GCGAGGCGCT GAACCTGGCG CTGGAGCGGC TCGCGGAGCG CGCCGCACGC
CTCTCCGATC CGGACTGGCG CGCGCGCTAT GTGGCCCTGC CCGACCATGC GGCCACCCGC
GCGCTGGCCG AGCGCTGGGG TCTGGCGACC TCGGCCCTCG ACGAGCTGCT CCGCGACGCC
TGA
|
|---|
| Protein sequence | MRAGDTIDRR FEVTEEVAAG GMGRIFRATD LQTGEPVAVK VLGNSDARAA ERFLHEARVL
AEIRHPGIVR YVAHGMLDVG APYLVMEWLG GENLAAYLRR VYGSELGDRT LDDTVPPSLN
APRLPVTEAL TVGRRLASAV AELHKRKLVH CDITPNNLVL ADGTIDHVKL IDFGTVRHRV
HEPGTSGDLI GTPFYMAPEQ ARSEGKLGPA TDVWAIGCVL YECLTGYKAF WADNIIVVLT
HILMDDPLPV RKLRPELPEA LASIVMRSLS KAASERPPDA EALAQLLEHL ERNRGDTDTI
PRVAAWPDGS APVKMAQQPT LTRVERRVSC LLFARHVAPG PKPSREQLAA VVAPLGAELE
RLADGSLLVS VPGSRTPSDQ ATHAARAALA LREAAPGLAM SLTTGRVEGP RQMPPIRVLT
RAARVLQRLP ASAIRLDEAT ASLLDARFHL SAVAEGADLR AERPYEAPRT LLGRRTRWVG
RQRELSTLLA TFHECVEDEI ARAVLVTAVA GMGKSRLCYE FERAVEDTEI DFLMLRGRGD
AVAAGSPFVL LAPALRRLFD IRSAAEPAEQ QAQLIARLAE VMPLPAAQHR VAPLLGELMD
VPFPVESSDA LRAARADPIL QGQLMQSAWL EWLTAECARQ PVILLIEDLH WGDLPSVNYI
DAALRSLSDA PLLVLALSRP EVHTAFPTLW SQRALSEIPL HPLSRRASQA LVREALGERV
SDEVVRAVVR RAGGNAFYLE ELIRAVADGN QLGEAELPDT IVGMVQSRLD ALGSDAKRVL
RAASVFGEVF WKTGVETLLG DDGVYGVDEW LSDLVAGEVL VGRPASRLVG EEEYAFSHAL
MRDGAYAMLT AEDRELGHRL AGDWLERSGE RDNLVLAEHF ARGGEPERAI PHYLRAAAQA
LESGDLEAAV QRAEQAAGAG ASGRELGALR SLQSVASYWL SDYVTSQRHG REAVALLAEG
GAEWFAAMGS AIVSSARLGE HDDELSARAV RATAAPGAEA AQIVCLCRVS FQLVFAGRMS
EAYQILARID ALLAAADAGA GRVSGPGRGE SIGVGAGIDA ITAAHVYHLR SFHAAQGGYP
DVFLPNLEAA VAAFERAGDI RNVELERSTI AWAWSEIGFF DHAAELARKN LAACIASGNQ
QAATYAKLNL GQILGYIGGN EDEARRLIAE AAEESRAVSN PRSEGWANAL VATLDYRAGD
PLASERHAAR AVELLRASPG LRVWGQALHA RALVALGRAA EALPKAEEAM EHLRRFGGLL
QGNALPPLVL ASALDATGQP DAAREALNLA LERLAERAAR LSDPDWRARY VALPDHAATR
ALAERWGLAT SALDELLRDA
|
|---|
| |