Gene Hoch_3611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3611 
Symbol 
ID8546001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4969386 
End bp4970225 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content66% 
IMG OID646388280 
ProductFHA domain containing protein 
Protein accessionYP_003268006 
Protein GI262196797 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.331547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0013234 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCCTGA GATATCTAGA GCCCATCTTC CGACCCTATC GCGCGGTGCG CAACGCGATC 
ATGCGCGTGC GCACGACGAA GGGAAACTTC CAGGCCGAGG TCTCTCGGGT CAAGGGCTTC
AAGAACGTCG CCGCGAGCAA GGCAAACCAG GCTCGCGCGC AAGTCCAGAA AGCCCAGGGC
CAGGCCCAAA AAGCCCAGGG CCAGGCCCAG AAAGCCCAGG GTCAAGCGCA AAAGATTCAG
GGTCAGGCGG GGCAGATGCA GGCCCGCGCC GGCCAGATGC AGGGACCACC TATGCAAGGA
CAGATGCCGC CCGGCTCGGC GCCGCCCGGA CAACCGCCGG GCGCGCCCAT GGGACTCAAT
CCCAACCCGC CGATCAAGAC GGTGGGTTTC TTTCGCCGCC GCAAGGTATG CACGCAGTGC
CAGTCGGAGC TGGACAAGAC CTGGGACAGC TGTCCGTATT GCGCCCAGAA CGCGCAAGCC
CAGCAGCCCG CGCCGGGAGG CGCGCCCAAG ACGCAGGCCT TCATGGTCGA CGCCGGCGGC
GGCACGCGTC AGCTCCTGGG CTGGCTCATC CCCATCGAGG GCCCGCAGCG CGGGGAGCTG
TACACGCTGG CCCCCAAGTC GGTCGTCGGC ACCGAGCCCA CCTGCCACGT GGTCCTCTCC
GATACGTATA TGTCGTCGCA GCACGCGGAG CTGGTTGCCG AGGGCGGGGT CTGGATCCTG
CGCGACCTGG GCTCGACCAA CGGCACCTAC GTCAACGACC AACGCATCAC CCAGCGCGAG
CTGGTCGATA ACGACTTCGT CCGCTTCGGA CAGTCGATGG TGAAATTCAA GAGCCTATGA
 
Protein sequence
MFLRYLEPIF RPYRAVRNAI MRVRTTKGNF QAEVSRVKGF KNVAASKANQ ARAQVQKAQG 
QAQKAQGQAQ KAQGQAQKIQ GQAGQMQARA GQMQGPPMQG QMPPGSAPPG QPPGAPMGLN
PNPPIKTVGF FRRRKVCTQC QSELDKTWDS CPYCAQNAQA QQPAPGGAPK TQAFMVDAGG
GTRQLLGWLI PIEGPQRGEL YTLAPKSVVG TEPTCHVVLS DTYMSSQHAE LVAEGGVWIL
RDLGSTNGTY VNDQRITQRE LVDNDFVRFG QSMVKFKSL