Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3572 |
Symbol | |
ID | 8545962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 4921523 |
End bp | 4923337 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 646388241 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_003267967 |
Protein GI | 262196758 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0299599 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.131149 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAAGC AATACACGTC GTTGGTCGAA ATGCAGGAAG ACGCATGCGA GCGCTTTGCC AAGCGCCGCG TGTTCGGGAC CAAGCTCGAA GGCATCTACC GGTGGATCAC CTACGCGGAC TTCGCGAGCC TGGTGAACCG CTTCCGCGCC GCGTTGGCAC AGCTCGGCGT CGAGGCCGGT GACCGCGTCG CCGTGGTCTC CAACAACCGC GTGGAATGGG CCGTGGGCGC GTACGCGACC TACAGCCTCG GCGGCCACTA CGTGCCCATG TACGAGGCGC AGTCGCCGGC CGAGCGGCGC TACATCATCG AGGACTCGAA CTCCAAGGTG GCGCTGGCGG CGACCGAGGC CATCTACCAG GAGCTGGCGG GCCTGATCGG CGAGGTCGAT AGCCTCGAGC ACGCGATCTG CTTCGACGCG TCCGAGTCGG CGCCGCACAG CTATCTGCAT CACCTCGCGG TCGGCGCCGA GAACCCGGTG TCCTCGGTGC ACCCCTCGCC CGATGACCTC GCCGGCCTGC TGTACACCTC GGGCACGACG GGCAAGCCCA AGGGCGTGAT GCTCAGCCAC AACAACATCT GCTCGAACCT GCGCGTGATG CCCGACCTGT TCCCGCTCTC GCACGAGGAC GTGACCTGCA GCTTCCTGCC CTGGGCCCAC GCCTTCGGCC AGACCGCGGA GCTGCACGGC ATCATCAGCG CGGGCGCCTC GATGGGCCTG GCCGAGAGCG TGCAGACGCT GATGGAGAAC TTCCTCGAGG TCCGGCCGAC GGTGCTGCTG GCGGTGCCGC GCATCTTTCA CCGCATCTAC GACGGCGTGA AGAAGCGCAT GGCCGATGAG CCCAAGCTGC GCCAGAAGCT GTTCGAGCAC GCGCTCTCGG TGTCGCAGAA GCGCACCGAG ATGCGCGATC ACGGCGGCAG CAGCACCTTG CTCGATATCC AGCACAAGCT CTTCGAGCGG GTGGTGTTCG CCAAGATCAA GGAGCGCTTC GGCGGGCGCC TGCGCTTCGT GATGTCGGGC GGCGCCGCGC TGGCGGTCGA GGTCGCCGAG TTCATCGATA ACCTCGGCAT CACGGTGTTC GAGGGCTACG GGCTCACCGA GACCTCGCCG GTGGCCACGG TCAACCGCCC GGGCGCGCGC CGCATCGGCA CTGTGGGCCA GGCCATCCCC GACGTGTCTA TCTATATCTG CGATGAGCAG GGCAAGCTGC TGCCGCCCGA GACCGACGGC GAGGTGCTCA TCAGCGGGCC CAACATCATG CAGGGCTATC ACGGCCTGCC CGAGGCCACG GCCGAGGTCA TGGTCGAGGT CGACGGCAAG CAGGCCTTCC GCACCGGCGA CATGGGCCGG CTCTCGCAAG ATGGCTTCCT GTCGATCACG GGCCGCTTCA AAGAGCAGTA CAAGCTCGAG AACGGCAAGT ACGTGGTGCC GACGCTGCTC GAGGATCAGC TCAAGCTGTC GGGCTTCATC ACCCAGGCGT TCATCTACGG CGACAACAAG CCGTTCAACG TGTGCCTGAT CGTGCCCGAC TTCGAGGCGA TTCAGAAGTG GGCCAAGAGC GACGAGGGCG GCGGCGTGAG CGGCGATCTA TCGCCCGAGG CGCTGTGCGC GGACGCGCGC GTCCACGCCA AGATCGGCGA GGAGCTGGCC GCGTACGGGG CCGAGTTCAA GCACTTCGAG CAGCCCAAGC GGTGGAAGCT CCTGGTCGAG GACTTCAGCC CCGAGAACGG CCTGATGACG CCCAAGATGA GCGTTCGCCG CCGCGCGGTG ACCGCGCGCT ACCAGGACGA GCTCGACAAG CTGTACATCG ACTGA
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Protein sequence | MSKQYTSLVE MQEDACERFA KRRVFGTKLE GIYRWITYAD FASLVNRFRA ALAQLGVEAG DRVAVVSNNR VEWAVGAYAT YSLGGHYVPM YEAQSPAERR YIIEDSNSKV ALAATEAIYQ ELAGLIGEVD SLEHAICFDA SESAPHSYLH HLAVGAENPV SSVHPSPDDL AGLLYTSGTT GKPKGVMLSH NNICSNLRVM PDLFPLSHED VTCSFLPWAH AFGQTAELHG IISAGASMGL AESVQTLMEN FLEVRPTVLL AVPRIFHRIY DGVKKRMADE PKLRQKLFEH ALSVSQKRTE MRDHGGSSTL LDIQHKLFER VVFAKIKERF GGRLRFVMSG GAALAVEVAE FIDNLGITVF EGYGLTETSP VATVNRPGAR RIGTVGQAIP DVSIYICDEQ GKLLPPETDG EVLISGPNIM QGYHGLPEAT AEVMVEVDGK QAFRTGDMGR LSQDGFLSIT GRFKEQYKLE NGKYVVPTLL EDQLKLSGFI TQAFIYGDNK PFNVCLIVPD FEAIQKWAKS DEGGGVSGDL SPEALCADAR VHAKIGEELA AYGAEFKHFE QPKRWKLLVE DFSPENGLMT PKMSVRRRAV TARYQDELDK LYID
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