| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3548 |
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| Symbol | |
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| ID | 8545938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 4884191 |
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| End bp | 4886239 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646388217 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_003267943 |
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| Protein GI | 262196734 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0555196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0513542 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGCAAT CACACAAGAC GATTCTCCTG TGGGCCCTGC TCATCTTCCT GTTCGTGATG
ATCTACAACC TCATCTCGGA CGGGACGAGC GGCGAGGAAA CGCTCGACAC CACCGAGTTC
AAGACGCTGC TGCAGGCGCG CATCGACGAG CGCCTGGCCG ATGCCGGTGA GGGGCCCGCG
CTCAGCGATG ACCGGCGGGC TCTGGCGCAG CGCGCCGGCG AGATCGCCAG CGTCACGGTC
GAGCCCAATC CCAACGACAA CGCCACCTAC GTGCTGCGCT ACGAGGGCTC GGGCGAGGAC
GGCCTCGACC CCGACAAGAA GACCCTGGTC TACGGCGAGT ACAAGGGCAC CATCGAAAAT
CTGCTGACCG CGGCCGGGAT CTCGTACGAG GTCAAGGCCA AGGAGGAGAG CACCTTCTGG
CAGTCGCTGC TGATCTCGTG GCTGCCGATG CTGCTCTTGT TCGCGCTGTT CTTCTTCTTC
ATGCGCCAGC TCCAGGCCGG CGGCGGCAAA GCCATGAGCT TTGGCAAGTC CAAGGCCCGG
CTGCTCACCG ACCACCAGAA CAAGGTGACC TTCAAAGACG TCGCCGGCGT CGAAGAGGCC
AAGGACGAGG TCGAGGAGAT CATCGCCTTC CTCAAGGACC CCAAGAAGTT CACGCGCCTG
GGCGGCCGCA TCCCCAAGGG CGTGCTGATG ATGGGCCCGC CCGGCACCGG CAAGACCCTG
CTCGCGCGCG CCATCGCCGG CGAGGCCGGG GTGCCCTTCT TCTCGATCTC GGGCTCTGAC
TTCGTCGAGA TGTTCGTCGG CGTCGGCGCC TCGCGCGTGC GCGATCTGTT CGAGCAGGGC
AAGAAGAACG CCCCGTGCAT CATCTTCATC GACGAGATCG ACGCCGTCGG TCGCCATCGC
GGCGCCGGCC TGGGCGGCGG TCACGACGAG CGTGAGCAGA CGCTCAACCA GCTCCTGGTC
GAGATGGACG GCTTCGAGTC CAACGACGGC GTCATCCTCA TCGCCGCGAC CAACCGCCCC
GACGTGCTCG ACCCGGCGCT GCTGCGGCCC GGCCGCTTCG ACCGCCGCAT CATCGTGCCG
CGCCCGGATC TGCGCGGCCG CACCGGTATC CTCGGCGTGC ACACGCGCAA GGTGCCGCTG
TCCACCGAGG TCGCCCTCGA GGTCATCGCC CGCGGTACCC CCGGCTTCTC GGGCGCGGAT
CTCGAGTCGC TGGTCAACGA AGCCGCTCTC ATCGCCGCCC GGCGCGACAA AGACCGGGTC
GACATGGAGG ACTTCGAGGA CGCCAAGGAC AAGGTCATGA TGGGCGCCGA GCGCCGATCC
ATGATCATCA GCGATAAGGA GAAGCGCACC ACGGCGTATC ACGAGGCCGG CCACGCGCTG
GTGGCCAAGC TGGTCGGGGC CGAGACCGAC CCCGTGCACA AGGTGTCGAT CATCCCGCGC
GGTCGCGCCC TCGGCGTCAC TCAGCTCCTG CCCACCGAGG ACCGGCTGGG CTTCACCCGC
GAGTTCGCGC TCAACAAGAT CGCGATCCTC ATGGGCGGCC GACTGGCCGA GGAGCTGGTG
CTCAAGCAGA AGACCACGGG CGCTGGCGAC GACATCGACA AGGCCACGGA CCTGGCCCGG
CGCATGGTCA CCGAGTGGGG CATGAGCGAC GTCATCGGAC CGCTCAACTT CGCCAGCGGC
GGCAAGCAGG AGGTGTTCCT GGGCCGCGAC CTGCCGCAGG CCGAGGCCTA CTCGCAGGAG
ACCGCGCAGC GCATCGACGG CGAGATCCGG CGCATCGTCA CCGACCAGTA CGAGCGCGCG
CGCCGGATGC TGGAAGAGAA TCGAGACGCG CTCGAGCGAG TCGCCCGCGG CCTGCTCGAG
TACGAGACCC TCGACGGAAA CGATATCGAC ACCCTGTGCC AGGGCGGTCG GCTGTCGCGG
CCCGCGGTCG TGAGCAAGCC GTCCGCCGAT GCCGAGTCCT CTGTGGACGA GGACGAGCGG
GAGGCGCGTC CTGCGCTGTT CCCGCCGCTC GGCAAGTCGG GCACCGACCC CGAACCCGAA
CCGGCCTGA
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| Protein sequence | MKQSHKTILL WALLIFLFVM IYNLISDGTS GEETLDTTEF KTLLQARIDE RLADAGEGPA
LSDDRRALAQ RAGEIASVTV EPNPNDNATY VLRYEGSGED GLDPDKKTLV YGEYKGTIEN
LLTAAGISYE VKAKEESTFW QSLLISWLPM LLLFALFFFF MRQLQAGGGK AMSFGKSKAR
LLTDHQNKVT FKDVAGVEEA KDEVEEIIAF LKDPKKFTRL GGRIPKGVLM MGPPGTGKTL
LARAIAGEAG VPFFSISGSD FVEMFVGVGA SRVRDLFEQG KKNAPCIIFI DEIDAVGRHR
GAGLGGGHDE REQTLNQLLV EMDGFESNDG VILIAATNRP DVLDPALLRP GRFDRRIIVP
RPDLRGRTGI LGVHTRKVPL STEVALEVIA RGTPGFSGAD LESLVNEAAL IAARRDKDRV
DMEDFEDAKD KVMMGAERRS MIISDKEKRT TAYHEAGHAL VAKLVGAETD PVHKVSIIPR
GRALGVTQLL PTEDRLGFTR EFALNKIAIL MGGRLAEELV LKQKTTGAGD DIDKATDLAR
RMVTEWGMSD VIGPLNFASG GKQEVFLGRD LPQAEAYSQE TAQRIDGEIR RIVTDQYERA
RRMLEENRDA LERVARGLLE YETLDGNDID TLCQGGRLSR PAVVSKPSAD AESSVDEDER
EARPALFPPL GKSGTDPEPE PA
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