| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3492 |
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| Symbol | |
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| ID | 8545881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 4820433 |
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| End bp | 4821449 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 646388160 |
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| Product | Pyridoxal-5'-phosphate-dependent protein beta subunit |
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| Protein accession | YP_003267887 |
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| Protein GI | 262196678 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.948459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.510498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCGCT CCCTCGTCAT CGCCGCGGCC GCGCGTCTCC AGGGCCGCGT GCGCCGCACC
CCGGCGCTGC GCTGCGAGGC CCTGGCGCGG CTGCGCCCCG AAGGCCCTGG CGTCTCGTCC
GAGGCCGCGG GGCCGGCGCT GTGGCTCAAG GCCGAGAGCC TGCAACACAT CGGCGCGTTC
AAAGCCCGCG GCGCCATGCA CGCGGTCGGA CGACTGTCCG AAGAGGAGCG CGCGCGCGGC
GTCATCACCT ACAGCTCGGG CAACCACGCC CAGGCCGTGG CCCTGGCCGC GCAGTTCTAT
GGCGTCGCCG CCGACATCGC CATGCCCGAG GACGCGCCCG CGGTGAAAGT CGCCGTGGTG
CGCTCGCTGG GCGCGCGCAT CGTGTTCGCC GGCACGACCT CGCCCGAGCG CCGCGAGGCC
GCGTTGGCGA TCCAGGCCGA GCGCGGGGGC GCGATCGTCG AGCCCTTCGA TCACGAGGAC
ATCATCGCCG GGCAGGGCAC GGCGACGCTC GAGCTGCTCG AGGACGTGGC CGCGCACGAC
GGCGCGCCGC TCGACGCGCT GCTGGTGCCG GTGGGCGGCG GCGGGCTGAT CGCGGGCGCG
TGTCTGGCGT GTGAGGGCAC GCCGACCAAG GTGTACAGCG TCGAGCCCGT GGGCTGCGAC
GCCATGGCTC AGAGCCTGGC CCGCGGCGAG CGCGTGGCGG TGACGCCGGG GCCGACCCTG
GCCGACGGGC TCAAGCCGAC CCTGGTCGGC GAGCGCAACT TCGCCATCGC CCGCGCGCGC
GTGGCCGGCT CCTTCACCGT GGACGACGAG GCCATCGGCC GCGCGCTGGC CGCGCTCGCG
GTGCACGCCA AGCTGTGGGC CGAGCCCTCG GGCGCCGCGG CGCTGGCCGC GTATCTGAGC
GGCCGGGTGC CGGCCGACGC GCGCCGGGTC GGCGTGATCG TCTCGGGCGG CAACGTCGCC
GCCGAGCTGG CTGCCGAGCT CATCGCCCGC CACGGTCCCG GCCTGGTCGG CGACTGA
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| Protein sequence | MDRSLVIAAA ARLQGRVRRT PALRCEALAR LRPEGPGVSS EAAGPALWLK AESLQHIGAF
KARGAMHAVG RLSEEERARG VITYSSGNHA QAVALAAQFY GVAADIAMPE DAPAVKVAVV
RSLGARIVFA GTTSPERREA ALAIQAERGG AIVEPFDHED IIAGQGTATL ELLEDVAAHD
GAPLDALLVP VGGGGLIAGA CLACEGTPTK VYSVEPVGCD AMAQSLARGE RVAVTPGPTL
ADGLKPTLVG ERNFAIARAR VAGSFTVDDE AIGRALAALA VHAKLWAEPS GAAALAAYLS
GRVPADARRV GVIVSGGNVA AELAAELIAR HGPGLVGD
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