| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3488 |
|---|
| Symbol | |
|---|
| ID | 8545877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 4816825 |
|---|
| End bp | 4818399 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646388156 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_003267883 |
|---|
| Protein GI | 262196674 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.562336 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCAC ACTCGCACAA GAACGGAAAG GGACGCAGCC CGGACGCGGG CGATCGCGCG
ACCGAGCACG GTGGCGCCGA TGATCGCGCC GCCATCACCA CCGCCGAGCG CGACGCCGCC
ACTACCGACA CCACCCACGC GGGTCGGCGC AGCGGCGACG CCGCCTCGCC CGCGGCCGCC
GCCATGAGCG GCGAAGGCGA TCTCCAGAGC GGCACGGTCT CGGGCGACTA CGTCATCCGC
GAGAAGATCG GCTGGGGTGG CTGCAGCACG GTGTACGCCG GCAAACACCG GGTGAGCGGC
CAGGAGGTGG CGATCAAGGT CATGCACCGC GGCCTCGCCG ATTCGCCGCG CCAGGTGCAG
CGCTTCGTGC AAGAGGCGCG CGCCGTGCAC CTCATCCACC ACCCGACCAT CGTCGAGATG
TACGACATCG GCCAGCTCGC CGATGGCCGG CCGTACATTG TCATGGAGCT GCTCCACGGC
ATCAACCTGG CCTCGCTGTT GCGCGAGCAG GGCCGGCTGT CGCCCGCCGA GGCCTTCGAG
GTGCTGGCGC CGGTGTGCGA GTCGCTGTCG GTGGCCCACG GCTCGGGCAT CGTGCACCGC
GACATCAAAG CCTCGAACAT CATCATCCTG GCCTCCGAGG GCGACGAGCG CCGGGTCAAG
CTGCTCGACT TCGGCATCGC CAAGCTGGTG CGCAGCGACC AGCCCGGCGG CATGCAGACC
ACGGTCGGCC ACGTCTTGGG CACGCCGCAC TCGATGGCGC CCGAGCAGAT CAAGGGCAAG
CCGGTCGACG GACGCACGGA CATCTACGCG CTCGGCGCCC TGCTCTACCG CCTGCTCACC
GGCCGCCATC CCTTCGAGGG CTGCGACGCG CTGGCGCTCA CGCGCATGCA CCTGCACGCG
GCCGCGCCCC TGCCCAGCCG CTTCGCGCCG GTGCCGCCGG CCATCGACGC GGTGGTGCGC
AAGTGCATGG AGAAGGACCC CGCGCGCCGC TACCAGGACA TCCCCGAGCT GCTCGCCAGC
CTGCGCGACG CGGTCGGCGC CGAGCGCCGC GAGCTGGTCT CGCAGGCCAT CGGCATCTAC
GTCGAGGGCC GCATCCTCGA GGGCGACGAG CCCGACGACG CCATCATCGA CGACCTGATG
AACATCCTCG ACGCCGCCGA GCAGGTGTTC GAGCGCCACG GCTTCTCGGT GCCGCTGAGC
ACCAGCAACT CGGTCCTCGG CGCCACCGTC GTCCCGGAAG GCGGCTTCGC CGACTTCCGC
CAGCGCACCA TGGATATCGC CGCCGAGCTC GACCAGGAGC TCGAGCAGCG CGAAGACGCC
GACCAGCGCG TGAGCATCAA CGTGTGCCTG CACGTGGCCG CCGCCATGGT CAAACGCCAC
GGCGCCGAGG CCGACGCAGA CGCCGAGATC ATCGGCGGCG CCATCGTCGA CGTCGGCACC
TGGGCGCCCA AGCATCCGGT CAGCGGCGTG TGCGCCACGG CCGAGACCCT GGGCATGGCG
CAGTCCGAGA GCGAGCGCAG CCCCCGCAGC TACGTCCGCA TTGTCACCCC CTCAGGCGTC
GGCTACCGAG CTTAG
|
|---|
| Protein sequence | MDAHSHKNGK GRSPDAGDRA TEHGGADDRA AITTAERDAA TTDTTHAGRR SGDAASPAAA
AMSGEGDLQS GTVSGDYVIR EKIGWGGCST VYAGKHRVSG QEVAIKVMHR GLADSPRQVQ
RFVQEARAVH LIHHPTIVEM YDIGQLADGR PYIVMELLHG INLASLLREQ GRLSPAEAFE
VLAPVCESLS VAHGSGIVHR DIKASNIIIL ASEGDERRVK LLDFGIAKLV RSDQPGGMQT
TVGHVLGTPH SMAPEQIKGK PVDGRTDIYA LGALLYRLLT GRHPFEGCDA LALTRMHLHA
AAPLPSRFAP VPPAIDAVVR KCMEKDPARR YQDIPELLAS LRDAVGAERR ELVSQAIGIY
VEGRILEGDE PDDAIIDDLM NILDAAEQVF ERHGFSVPLS TSNSVLGATV VPEGGFADFR
QRTMDIAAEL DQELEQREDA DQRVSINVCL HVAAAMVKRH GAEADADAEI IGGAIVDVGT
WAPKHPVSGV CATAETLGMA QSESERSPRS YVRIVTPSGV GYRA
|
|---|
| |