Gene Hoch_3480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3480 
Symbol 
ID8545869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4807981 
End bp4808460 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content68% 
IMG OID646388148 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_003267875 
Protein GI262196666 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0202841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.489081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAGG TATTCGAAGG CAAACTCACC AGCACGGGTC TGCGCGTCGG CATCGTCTGC 
GGACGCTTCA ACGGCTTCAT CGTGCAGTCT CTCCTCGAAG GCGCGGTCGA CGCCGTGGTG
CGCAGCGGCG GCAGCGCCGA CAGCATCTCG GTGTACTGGT GCCCGGGCGC CTACGAGATC
CCGCAGGTGC TGCGCGAGGT CGTGGCCCGC GGCAGCCACG ACGCCGTGGT CTGCCTGGGC
GCGGTCATCC GCGGCTCGAC GCCGCATTTC GACTACGTGG CCGGCGAGGT CTCCAAGGGC
ATCTCGCAGG TCGCGGCCGG CGCCGAGATC CCGGTGACCT TCGGCGTGCT CACCACCGAC
ACCATCGAGC AGGCCATCGA GCGCGCCGGT ACCAAGGCCG GCAACAAGGG CTTCGAGTCG
GCCATGGCCG CGATCGAGAT GGTCAACCTG TTCCGCATGA TCCGAGGCGC TGCGCAATGA
 
Protein sequence
MPKVFEGKLT STGLRVGIVC GRFNGFIVQS LLEGAVDAVV RSGGSADSIS VYWCPGAYEI 
PQVLREVVAR GSHDAVVCLG AVIRGSTPHF DYVAGEVSKG ISQVAAGAEI PVTFGVLTTD
TIEQAIERAG TKAGNKGFES AMAAIEMVNL FRMIRGAAQ