Gene Hoch_3468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3468 
Symbol 
ID8545857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4792521 
End bp4794155 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content77% 
IMG OID646388136 
ProductFHA domain containing protein 
Protein accessionYP_003267863 
Protein GI262196654 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.371082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.175493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATCT GCGCGAGCTG CGAGCGGGAG AATCCACCGG AGGCGCGGTT TTGTCTGGGC 
TGCGGCACGG CCCTGGCCGG GGCGGAGGCG TCTGCTTCGG CCGATGAGAC CGGAGCGCCC
AGCGCGGGGT TGCCCGCCGA CGACGATCCA GACCCGGGCG GGGACCAGCC GAGCCTGGGC
GAGGGCCGGC GCTGCTTTCG CTGCGCCGCG CTCAACGCCC GGAACATGCA CTTTTGCCGC
AACTGCGGGG CCGCGATGGA GCGCCCGGAG CCGGGCGCGC GCGCTGCAGA CAGCGCGCGC
GCTGCAGACA GCGCGGACAC CCGCGGGCGC CCGGGGGGCC GCGCGCCCGT GCCCGAGCCC
GCGCTGCTGG CCGCGCCGCG CGACGACGCC GAGGCCCGCC GGCCGCTGCC GCGCCGCCAG
TGCCCGCACT GCCAGGCGCA GACCCCGGCC GCGTACGCCT TTTGCCAGCA CTGCGGCAAG
AACCTGCCCA GCCTGTCCGA GGCCGTGCGC ACCGGCGCCC TGGTCAGCGG CGAGACCGGC
CGAGGCGACG GCGACGGCGA CGGCGACGAC GGCGACGAGC TCGCCATGCC GCCGCCGATC
CGGGCGGTGC CGCCGGCGCC CGCGGGCGCG GCCGACATGA GCGGCGACCC GCGCATCGGC
GCGGCCCCGG CCAGCGACGA CGAGGGCGAC GAGGGCGAGG GCGTGACCCG CCGCGGGCGC
GCCGGCCGCC CGCGCCCCCT GCGGCCCACG CCGCCGGGCG GCGTCCCGAT GCCGGCGCCG
GCGCCGGCGC CCGCGCCCGT GCCGATTCCG GTCCGCTCGC AGACCACCTT GCCGGTCGCC
ACCGGCACCG CCAGCGCCCA GCGCGGGCGC GCCGACGCCG CCGCCGAGCG GGCGCGCGAG
GGCGAGGGCG GCGGCCCGGG CTCGGCCCCG TACCCGCCGG CCGCGGATTC GCCCGCGCTG
TCGAGCGCCT CGGGGCACAT CGAGTCGCAG CCGGTGTGGG GCACGCTGGT GGCGGTCAAG
CCCGACGGCA CCGATGGTGC CCGCTACGAG CTGGCCGGCG AGTGGATGGA CGTCGGCCGC
GCCGGCGCCG ACATCTGCTT TCCCGACGAC CACTTCCTGG CCCCGCGTCA CCTGCGCCTG
TGGCGCGTGG GCGGGGCCGT GCGCGCGATC CCGCTCGACA CCTTCAACGG CGTGTACCGG
CGCGTGCGTC GCACCGCGCT GGCCAGCGGC GACATCCTGA TGCTCGGCCA GGAGCTTGTG
CGCTTCGACC TCGTCGACGA GGAGGAGCGC CGGGCCACGC CGCTCACGCG CCACAGCGTG
GTGCTCTTCG GCTCCTTGCC GCGCGAGCCC TGGGGCCGTC TGAGCCAGCT CCTGGCCAAC
AGCGGCATCC GCGACGTCCG CCACCTGTAC GGCGCCGAGG TCGTGGTCGG CCGCGAGGAC
GGCGACCTGC GCTTTCCCGA CGACGCCTTC CTGTCGCGCC GCCACGCCGC GCTGAGCTGG
GACGGCGAGA CCTGCACCCT CGCCGACCTG GGCAGCTCCA ACGGCACCTT TCTGCGACTG
GCCGCGCCGG TCGAGGTCGA CGACGGCGAG CATCTACGGA TCGGGGATCA TCTGTTACGA
TTGGAGATCG AGTGA
 
Protein sequence
MLICASCERE NPPEARFCLG CGTALAGAEA SASADETGAP SAGLPADDDP DPGGDQPSLG 
EGRRCFRCAA LNARNMHFCR NCGAAMERPE PGARAADSAR AADSADTRGR PGGRAPVPEP
ALLAAPRDDA EARRPLPRRQ CPHCQAQTPA AYAFCQHCGK NLPSLSEAVR TGALVSGETG
RGDGDGDGDD GDELAMPPPI RAVPPAPAGA ADMSGDPRIG AAPASDDEGD EGEGVTRRGR
AGRPRPLRPT PPGGVPMPAP APAPAPVPIP VRSQTTLPVA TGTASAQRGR ADAAAERARE
GEGGGPGSAP YPPAADSPAL SSASGHIESQ PVWGTLVAVK PDGTDGARYE LAGEWMDVGR
AGADICFPDD HFLAPRHLRL WRVGGAVRAI PLDTFNGVYR RVRRTALASG DILMLGQELV
RFDLVDEEER RATPLTRHSV VLFGSLPREP WGRLSQLLAN SGIRDVRHLY GAEVVVGRED
GDLRFPDDAF LSRRHAALSW DGETCTLADL GSSNGTFLRL AAPVEVDDGE HLRIGDHLLR
LEIE