| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3456 |
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| Symbol | |
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| ID | 8545845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 4773779 |
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| End bp | 4776037 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646388124 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein |
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| Protein accession | YP_003267851 |
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| Protein GI | 262196642 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02440] fatty oxidation complex, alpha subunit FadJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0405944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATA CCCAAGCGAA ATCCGTTTCC ATCCGCGTCG GCGATGACGG CGTCGCCGTG
GTCACCATCG ACGTCCCCGG ACAGCCGGTC AACACCCTGC GCAGCGAGCT CATCGCCGAG
TTCGACGCCG CCCTGAGCGC GCTCGAGGGC GACGAGCAGG TGCGCGCGGC CGTCATCGTC
TCCGGCAAGG AGCGCGGCTT CGTCGCCGGC GCCGACATCA AGGAGCTCGA GCGCATCGAG
ACCGCGGCCG ACGGCGAGGC GGTGTCGCGC AGCGCCCAGG AGCGCTTCGC CCGCCTGGCC
GGGTTCCGCG TGCCCGTGGT CGCCGCGATC CACGGCGACT GCCTGGGCGG CGGCCTCGAG
CTGGCGCTGG CCTGCCACGG CCGCGTGGCC AGCGACGCCG ACGAGACCTC GCTGGGCCTG
CCCGAGGTGC AGCTCGGCCT GTTGCCGGGC GCCGGCGGCA CCCAGCGGCT GCCGCGGCTC
ATCGGCCTGC AGGCCGCCCT CGACATGATC CTCACGGGCA AGCGGCTGCG GGCCAAGAAG
GCGCGCGCGC TGGGCCTGGT CGATCTCGTG GTGCCCGCCG CCGTGCTCGA GCGCGCCGCC
CGCCAGCACG CGCTGCAGCT CGCCGAGGCG CGCGCGGCGC TGCGCAAGCA GCGCGCCGGC
AAAGGCGCCC TGAGCCGCAT GGCGGCGACC ATGCGCGAGG CCGTGCGCGG CGTGAACCTC
AGCGGCGACC TGCAGGAGCT GGTGCTCGAG GACAATCGTC TGGGTCGCAA GGTGGTGTTC
GACACCGCGC GCAAGAAGCT GCTGGCCAAG ACCCAGGGCA ACTACCCGGC CCCCGAGAAG
GCGCTCGAGG CCATGCGCCT CGGCGCCGCC AAGCCCGAGG ACGGCTACGC CGCCGAGGCG
CGCTTCTTCG GCGAGCTGGC CGTGAGCCCC GAGGCCAACG AGCTCATCCA GATCTTCCTG
GCCACCACCG CGCTCAAGAA GGACAGCGGC GTGAGCGGGC AGGGCGCCGA GGCCCGGCCC
CGGCCTGTGC GCAAGGTGGC CATGCTCGGC GCCGGGCTCA TGGGCGCCGG CATCGCCTAC
GTCAGCGCCG CCAAGGCCGG CGCCCAGGTG CGGCTCAAAG ACCGCGACCC GGCCAGCGTC
GGCCGCGGCC TGCGCGCCGT GCGCGAGATC GTCGACGGCC AGCTCAAGCG CAAGCGGCTG
AGCGCGCGCC AGCGCCTCGA GCTGATGAAC CGGGTGACGC CGACCACCGA CTACAGCGGC
TTCGGCGACG CCGACGTGAT CATCGAGGCG GTGTTCGAGG ACCTCGCGCT CAAGCGCCGC
ATCGTCGCCG AGGTCGAGGC CGCCTGCGGC CCCGAGACCA TCTTCGCCTC GAACACCTCG
ACCATCCCCA TCGGGCGCAT CGCCGAGGCC AGCACCCGGC CCGAGACCGT CATCGGCATG
CACTACTTCT CGCCCGTGGA CAAGATGCCG CTGCTCGAGA TCATCGTCAC CGAGCAGACC
GCGCCCTGGG TCACGGCCAC CTGCGTGGCC CTGGGCAAGG CGCAGGGCAA GACCGTGATC
GTGGTGCGCG ACAGCGTCGG CTTCTACACC TCGCGCATCC TGGGCCCGTA CATGAACGAG
GCCTTCCACA TCCTGGCCGA GGGCGTCTCG GTCGAGCGCA TCGACCGCGC CCTGGTCGAT
TTCGGCTTCC CCGTCGGGCC GGTCAAGCTG CTCGACGAGG TCGGCGTAGA CGTCGCCCAC
AAGGCCGGCA CGGTCATGCG CGAGGCCTTT GGCGAGCGCA TGGACGCGCC TCCGGGCATG
GAGCGGCTGA TCGACGACGA GCGCCTGGGG CGCAAGAATC AGCGCGGCTT CTACCTCTAC
GGCGGCAAGA AGAAGGGCGT CGACGACAGC GTCTACGAGC TGCTCGGGGT CGCGCCCGGG
CGCGAGACCG CGGCCGACGA GATCGCCGAG CGCTGCGCCT TGCAGATGGT CAACGAGGCC
GCCCACTGCT TTGGCGAGGG CGTGCTGCGC AGCGCGCGCG ACGGCGACAT CGGCGCGATC
TTCGGGCTCG GCTTTCCGCC GTTCCGCGGC GGCCCGCTGC GCTACGTCGA CGCCCTCGGC
GCCGGCGTCG TGGTCGAGCG CCTGCGCGCG CTCGCCGGCC GCTTTGGCAA GCGCTTCGAG
CCCGCGCCGG TGCTGGTCGC CATGGCCGAC AAGAAGCTGC GCTTCTACCC CGACGCCGCC
GGTCAGGGCA GCGTGGTCGA GCCCGGCCGC CACCGCTGA
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| Protein sequence | MSDTQAKSVS IRVGDDGVAV VTIDVPGQPV NTLRSELIAE FDAALSALEG DEQVRAAVIV
SGKERGFVAG ADIKELERIE TAADGEAVSR SAQERFARLA GFRVPVVAAI HGDCLGGGLE
LALACHGRVA SDADETSLGL PEVQLGLLPG AGGTQRLPRL IGLQAALDMI LTGKRLRAKK
ARALGLVDLV VPAAVLERAA RQHALQLAEA RAALRKQRAG KGALSRMAAT MREAVRGVNL
SGDLQELVLE DNRLGRKVVF DTARKKLLAK TQGNYPAPEK ALEAMRLGAA KPEDGYAAEA
RFFGELAVSP EANELIQIFL ATTALKKDSG VSGQGAEARP RPVRKVAMLG AGLMGAGIAY
VSAAKAGAQV RLKDRDPASV GRGLRAVREI VDGQLKRKRL SARQRLELMN RVTPTTDYSG
FGDADVIIEA VFEDLALKRR IVAEVEAACG PETIFASNTS TIPIGRIAEA STRPETVIGM
HYFSPVDKMP LLEIIVTEQT APWVTATCVA LGKAQGKTVI VVRDSVGFYT SRILGPYMNE
AFHILAEGVS VERIDRALVD FGFPVGPVKL LDEVGVDVAH KAGTVMREAF GERMDAPPGM
ERLIDDERLG RKNQRGFYLY GGKKKGVDDS VYELLGVAPG RETAADEIAE RCALQMVNEA
AHCFGEGVLR SARDGDIGAI FGLGFPPFRG GPLRYVDALG AGVVVERLRA LAGRFGKRFE
PAPVLVAMAD KKLRFYPDAA GQGSVVEPGR HR
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