Gene Hoch_3438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3438 
Symbol 
ID8545826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4751517 
End bp4751894 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content71% 
IMG OID646388105 
ProductRNP-1 like RNA-binding protein 
Protein accessionYP_003267833 
Protein GI262196624 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0963576 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0234751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAAACA AGATTTTTGT CGGGGGCCTG AGCTGGGATA CGGACGATTC GAGCCTGCGT 
GCAGCGTTCG AGCGGTTCGG AGCCGTCACC GAAGCCAAAG TGATCACGGA TCGGGATACA
GGTCGCTCGC GCGGTTTCGG ATTTGTCACC TTCGCCGAGT CCGGCCAGGC CGCGGCAGCC
ATCGAAGAGA TGGACGGTGT TGAGCTCGAC GGTCGCAACA TCCGCGTCAA CGAGGCTCAG
GAGCGCAGCC GTGGCGGCGG CGGCGGCGGC GGTGGCGGTG GCTACCGCGG CGGCGGCGGC
GGCGGCGGCG GTGGCGGTCG CGACGGCGGT CGCCGCCGTG GCGGCCGTGA CGGCGGCGGC
GGCGGCGGCC GCTGGTAA
 
Protein sequence
MSNKIFVGGL SWDTDDSSLR AAFERFGAVT EAKVITDRDT GRSRGFGFVT FAESGQAAAA 
IEEMDGVELD GRNIRVNEAQ ERSRGGGGGG GGGGYRGGGG GGGGGGRDGG RRRGGRDGGG
GGGRW