| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3422 |
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| Symbol | |
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| ID | 8545810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 4723176 |
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| End bp | 4725818 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646388089 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_003267817 |
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| Protein GI | 262196608 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0998408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0667766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGC GCACGCCGCG AGACACGCCG ATGATGCGGC AGTACATGGA GATCAAGGAC
CAGCATCCCG ACGCGGTGCT GTTCTTCCGC CTCGGCGATT TCTACGAAAT GTTCTACGAG
GACGCCGAGG TAGCGGCCAA GGCCCTCGAT CTCACGCTCA CCTGTCGCCA CAAGGACAGC
GCCAACCCCG TGCCCATGGC CGGCGTGCCG CATCACGCCG CGCGCGGCTA CATCGCCCGG
CTCACCGAAC AGGGCTACAA GGTCGTGGTC TGCGAGCAGG TCGAGGACCC CAAGCTGGTC
AAGGGCATCG TCAAGCGCGC GGTGGCCCAG GTCATCACGC CCGGCGTGGT GCTCGACGAG
GAGGTCCTCG ACCCCAAGCA GCCGCGCTAT CTGGCCGCGA TCGCGTGTGA GGGCGGGCGC
TACGGCCTGT CCTTTCTCGA CGTCTCCACC GGCGAGTTCC GGGCCACCGA GCTCGACAGC
GAGGACGGCT TGCTCGACGA GCTGGCCCGG GTGCGGCCGC GCGAGATCCT GGCCGGCGCG
CGCAACCTGG CCGAGGGCGG TCCGCTCACG GCGACCCAGC GCGACTTCAA CCAGGTCACC
TATTCGCCGG TCGAGCCCCA CACCTGGGGC CAGGCCAAGA CGCTGTTGGT CTCGCTGCTC
GCGGGCGACA GCGCCAGCCT CGGCCTCGAG GAGCGCATCC TGGCCTCGCG CGCGGCCGCC
GACGTCATCG GCTACGCGCG CAGCACGCAG CCCACCGGGG TGTTGCCCGT GAGCCGCTTG
CAGCTCTACG AGCCCGGCGA CACCATGATG CTCGACGAGG CGGCCATCGC CAACCTGGAG
CTGACCGAGA CGCTCATCGG CGGCCGGCGC GCGGGCACGC TGCTGTCGGT CATCGACGAG
ACCTGCACCG CCCCGGGCGG TCGTCTGCTG CGCCACTGGC TGCTGTATCC GCTCAGCGAG
GTGGCCCCGA TCCGGCGGCG CCAGGACGCG GTCGGCTATT TTGTCGAGCA CGCCAGCCTG
CGCCGTTCGG TGCGCGAGGT GCTCGAGGGC GTGCACGATC TCGAGCGTCT GGCCGCGCGC
GTCGGCCTCG GCGTGGCCAC GCCCCGCGAC CTGGGCCGGC TGCGCGACTC GCTGGTGCAG
CTCCCGTCGC TGTCGGCGCT CTTGGCCAGC CCGGTGGTCC AGGCCGGGGG CGAGAGCCCG
CTCGACGCGG TGCCCGCGCT GCTGCGTTTC AACAACGCCA TCCTCGGCGA GCTGGCCGAG
CTGCAGGGCT TGCTGTCGCG CGCGCTGGTC GACGAGCCCG GGCCGCTGGC GCGCGAGGGC
GGCTTCATCC GCGCCGGCTA CTGCCGCATC GTCGACGAGA GCCGCAGCCT GGCCGACGGC
AGCAAAGAGG CCATCTTGGC CATCGAGACC CGCGAGCGCG AGCGCACCGG CATCGGCTCG
CTCAAGGTCA AGTACAACCG CGTCTTCGGC TATTACATCG AGGTCACCAA GGCCAACCTG
GCCCGGGTCC CGGCCGAGTA TGTGCGCAAG CAGACCATCG CCACGGGCGA GCGCTACGTG
ACCACCGAGC TGGCCGAGCT CGAGACCAAA GTGCTGGGCG CCCAGGAGCG CTTGCTCGAG
CGCGAGCAGG AGCTGTTCGC CGAGCTGTGC GCGGCCGTGG GCGAGCGCGC CGGCGGGCTG
CGCGACGTCG GCGAGCGGGT CGCCGGCATC GATTGTCTGG CCAACCTGGC CGAGATCGCG
CACGTGCGCG ACTACCGCTG CCCCGAGGTC GACGACGGCG AGCGCCTCGA GATCGTCGAG
GGTCGTCACC CCGTGGTCGA GCGCACCGTG CCGACCGGGC GTTTCGTGCC CAACGACTGC
CAGCTCGACC CGCGCGAGGC GCAGATCCTG CTCATCACCG GGCCCAACAT GGCCGGCAAG
TCGACCTACA TGCGGCAGGT GGCCCAGATC GTCGTGCTCG CGCAGATGGG CAGCTTCGTG
CCGGCCAAGC GGGCGCGCGT GGGCATTGTC GACCGCGTGT ACACGCGCGT GGGGGCGGCC
GACAACCTGG CCCGCGGCGA GTCCACCTTC ATGGTCGAGA TGCGCGAGAC CTCGGCCATC
ATGCGCGGGG CCACGCGGCG TTCGCTGGTG GTGCTCGACG AGGTCGGCCG CGGCACCTCG
ACCTTCGACG GCGTGTCCAT CGCGTGGGCG GTGACCGAGT ATCTGCACGA CGCCATCGGC
GCGCGCACCT TGTTTGCCAC CCACTATCAC GAGCTGTGCG CGCTGTCCGA GGTGCGGCCG
CGGGTGCGCA ACGTGTCGAT GGCGATTCGC GAGCACGAGG GCGACATCGT GTTCCTGCGC
CAGGTGGTCG CCGGCGGCGC CAGCAAGAGT TACGGCATCG AGGTCGCGCG GCTGGCCGGG
CTGCCGCGAT CCTTGGTGTC GCGGGCGCGG CAGATCTTGG CGCAGCTCGA GGGCGGGCGC
GAGTGGCACC AGCCCAGCCA GCTCACCCTG TTCTCGGCCG CGCAGTCGGC GCCGCCCGAC
GAGCCCGAGG GCGAGGCCGG AGGCGCCATC GTCGAGCGCC TGCGCGGCCT CGACCCGCAG
CGCATGACGC CCATCGAGGC GCTGCAAGTG CTCGCCGAGC TGTGCTCGGA AGCCGGGCGC
TAG
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| Protein sequence | MAKRTPRDTP MMRQYMEIKD QHPDAVLFFR LGDFYEMFYE DAEVAAKALD LTLTCRHKDS
ANPVPMAGVP HHAARGYIAR LTEQGYKVVV CEQVEDPKLV KGIVKRAVAQ VITPGVVLDE
EVLDPKQPRY LAAIACEGGR YGLSFLDVST GEFRATELDS EDGLLDELAR VRPREILAGA
RNLAEGGPLT ATQRDFNQVT YSPVEPHTWG QAKTLLVSLL AGDSASLGLE ERILASRAAA
DVIGYARSTQ PTGVLPVSRL QLYEPGDTMM LDEAAIANLE LTETLIGGRR AGTLLSVIDE
TCTAPGGRLL RHWLLYPLSE VAPIRRRQDA VGYFVEHASL RRSVREVLEG VHDLERLAAR
VGLGVATPRD LGRLRDSLVQ LPSLSALLAS PVVQAGGESP LDAVPALLRF NNAILGELAE
LQGLLSRALV DEPGPLAREG GFIRAGYCRI VDESRSLADG SKEAILAIET RERERTGIGS
LKVKYNRVFG YYIEVTKANL ARVPAEYVRK QTIATGERYV TTELAELETK VLGAQERLLE
REQELFAELC AAVGERAGGL RDVGERVAGI DCLANLAEIA HVRDYRCPEV DDGERLEIVE
GRHPVVERTV PTGRFVPNDC QLDPREAQIL LITGPNMAGK STYMRQVAQI VVLAQMGSFV
PAKRARVGIV DRVYTRVGAA DNLARGESTF MVEMRETSAI MRGATRRSLV VLDEVGRGTS
TFDGVSIAWA VTEYLHDAIG ARTLFATHYH ELCALSEVRP RVRNVSMAIR EHEGDIVFLR
QVVAGGASKS YGIEVARLAG LPRSLVSRAR QILAQLEGGR EWHQPSQLTL FSAAQSAPPD
EPEGEAGGAI VERLRGLDPQ RMTPIEALQV LAELCSEAGR
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