| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3394 |
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| Symbol | |
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| ID | 8545782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4690260 |
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| End bp | 4692686 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646388061 |
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| Product | penicillin-binding protein, 1A family |
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| Protein accession | YP_003267789 |
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| Protein GI | 262196580 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.145767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.859795 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCACCGC TGTCGCTGCT CCGTTTGTTA TTGCTGCTGC TGGTCTACGG CCTGTTTCTC
GGTCTGGGTG GCATCTACTA TGTGGTCGCC GAGTTCTCGA GCGAGCTGCC GCGCAACCTC
GCCGCCGCCC TCGACTACCG ACCGCACCGC GCCTCGCGCG TCTACGATCG CGGCGGCCAG
CTCATCGGCG AGTTCTTCTT GCACAAGCGC ATCCTGGTGC CGCTCGAGCG CATCCCGGGC
CATGTGCAGA ACGCCTTTGT CGCGGCCGAG GACGGTCGCT TCTGGGAGCA CCCGGGCTTC
GACCCCGTGG GCATCACGCG CGCGGCCATC ACCAACTTCC AGAGCGGGCG CACGCGCCAG
GGCGCCTCGA CCATCACCCA GCAGATCACG CGCATGCTGA TGCTGTCGAA TCAGCGCACC
TACGAGCGCA AGATCAAGGA GCTCATCCTC AGCGTGCGCG TCGAGCGCGA GCTCTCCAAA
GCCGAGATCC TGCGCCTGTA CCTCAACCAC GTGTATCTCG GCCGCGGCGC GTACGGCGTG
CAGGCCGGCG CCGAGAACTA TTTCGGCAAG AACGTCGAGC ATCTGACCGC GGCCGAGGCC
GCGCTGCTCG CGGGGCTGGT GCAGGCGCCG AGTCGCTACG CGCCCTCGCG CAATCTCGAC
GCCGCGCGCG CGCGCCAGCG CTACGTGCTC GAGCGCATGT ACAGCGACGG CCACCTCAGC
CGGCAGCAGC GCGACCGCGG CCTGGCCGAG CCGCTGGGCC TGGTCGAGCA CCGCACCCCG
CTCAACCGCG TCTCCGCGCC CTACTTCGTC GAGCACATTC GCCGCTGGGC GTCGCAGGAG
TTCGACCCCG ATCGCGTGCT CTTTGGCGGG CTGCACATCC ACACCACCCT CGACGCCGGC
CTCCAGCTCA GCGCCGAGGC CGCGGTGCGC GCCGGACTCA TCGGCCTCGA TCGCCGCATC
GGCTTTCAGG GTCCCGTCGG ACACCTGGAC GGCGACGAGC TCGACGCCTT CTTGCGCGGG
CCGCTGCGCC CCTACGTCCA GGGCCAGGCG ACCGTGAGCG CGGCGGCCAC GGCCCAGGGT
CTGCTGCCCG ACGTCGCCTA TCTCGGCGCC ATCACGCGGC TCGACGGAGC CGCTGGCGCG
CGCGTCAGCC TCGGCGCCGT CGAGCTGCCG CTCCAGAGCG GCGACGCGCG CCTGGTGCGG
CAGTGGCGTC GGCCCGAGCC CCCGGCGGCC AGCGCCGCCG CCGCCGAGGG CAGCGCTGAG
GCCCCGCCGC CGGTGGTGCC CGCGCCGGCC CCGGGCGCCG ATGTCGTCCG CGTCGGCGAT
CTCGTCCCCG TGTCCGTCCT CATCGGCAGC GACGGCCCCA GCGCCGTACG CCTGGCGCAG
ACGCCCGACG TCGAGGCCGC GCTGGTGGCC CTCGATCCCC ACACCGGCGA CGTCCTGGCC
ATGGTCGGCG GCTACGACTA CGCGCGCAGC CAGTTCAACC GCGCCACCCA GGCCCGGCGG
CAGATCGGCT CCGCGCTCAA ACCCTTCATC TACGCCCTGG CCTTGCGCGG CGGCATGAGC
CACCTCGACA CCGTCGTCGA CGCCCCGGTG GCGGTACCGA CCGCGGGCGG CGTATGGACC
CCGGGCAACT ACGACGGCCG CTTCGCCGGT CGGGTCACCC TGCGCATGGC GCTGGCCAAA
TCGCTCAACA CCGTGAGCGT ACGCCTGGTG TTGCGCTATG GCGTCGACCG CCTCATCGAG
CTGTTGCGCG CGGTGGGCAT GAGCTCGCCG TTGCCCGAGC ACGTCTCCAT CTCGCTCGGC
ACCCCGGACC TCAGCCCGCT CGAGGTCGCG GCCGGCTACA GCGCCTTTGC CAACGGCGGC
AAGCGCACCG AGCCGCGCTT CGTCACCCAC GTCGATGACG ACGACGAGCA TCTGCTCCTC
GACCAGCGCA GCGCCTTGCC CAGCGAGCAG GTCATCACCC CGCAGCTCGC CTACCTCGTC
ACCAGCCTGA TGACCGAAGT CGTCGAGAGC GGCACCGGAC GTCGCGCCCA ATCCCTGGGC
CGGCCGACTG CGGGCAAGAC CGGCACCTCG AGCAACCACC GCGACGCCTG GTTCATGGGC
TTCACCGCCG ACCTCTTGTG TGGCGTGTGG GTGGGCCGCG ACGACTTCAC CCCCATCGGC
GCCAAAGCCA CCGGCGGCAG CGCCGCGTTG CCCATCTGGC TCCAGTTCAT GAGCGCGGCC
CATGCCAGCC GCATCCCGCG CCCCTTCCCC GTACCCGAGG ACATCTGGCA GGTCTACGCC
GACCCCGTCT CGGGCCAGCC CAAACCGCCC GGAGCCGCCC GCGGCACCTG GATTCCCATG
GCCCGCGGCA CCGTGCCGAG CAAATTCGGC GTGCGCGTAC GCCCCTTTGC CGACGCGCCC
TGGTCCGCCT TCCCGGCCGC GCCCTGA
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| Protein sequence | MSPLSLLRLL LLLLVYGLFL GLGGIYYVVA EFSSELPRNL AAALDYRPHR ASRVYDRGGQ
LIGEFFLHKR ILVPLERIPG HVQNAFVAAE DGRFWEHPGF DPVGITRAAI TNFQSGRTRQ
GASTITQQIT RMLMLSNQRT YERKIKELIL SVRVERELSK AEILRLYLNH VYLGRGAYGV
QAGAENYFGK NVEHLTAAEA ALLAGLVQAP SRYAPSRNLD AARARQRYVL ERMYSDGHLS
RQQRDRGLAE PLGLVEHRTP LNRVSAPYFV EHIRRWASQE FDPDRVLFGG LHIHTTLDAG
LQLSAEAAVR AGLIGLDRRI GFQGPVGHLD GDELDAFLRG PLRPYVQGQA TVSAAATAQG
LLPDVAYLGA ITRLDGAAGA RVSLGAVELP LQSGDARLVR QWRRPEPPAA SAAAAEGSAE
APPPVVPAPA PGADVVRVGD LVPVSVLIGS DGPSAVRLAQ TPDVEAALVA LDPHTGDVLA
MVGGYDYARS QFNRATQARR QIGSALKPFI YALALRGGMS HLDTVVDAPV AVPTAGGVWT
PGNYDGRFAG RVTLRMALAK SLNTVSVRLV LRYGVDRLIE LLRAVGMSSP LPEHVSISLG
TPDLSPLEVA AGYSAFANGG KRTEPRFVTH VDDDDEHLLL DQRSALPSEQ VITPQLAYLV
TSLMTEVVES GTGRRAQSLG RPTAGKTGTS SNHRDAWFMG FTADLLCGVW VGRDDFTPIG
AKATGGSAAL PIWLQFMSAA HASRIPRPFP VPEDIWQVYA DPVSGQPKPP GAARGTWIPM
ARGTVPSKFG VRVRPFADAP WSAFPAAP
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