| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3323 |
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| Symbol | |
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| ID | 8545711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 4588739 |
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| End bp | 4590808 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646387990 |
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| Product | peptidase M61 domain protein |
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| Protein accession | YP_003267718 |
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| Protein GI | 262196509 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0788147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00902527 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCAGCGCC ACCCAGGCGG GAGAAGTAAG CGATCGGCCG CGCCCGCGCG CAGCCGGCTA
CCCCGGGTCG CGATCCTCGG CATCGCGTTC GCGCTGAGTC TCGGCACAGC CTGCCGCGGC
GGCGGCGCCA GCGCACCGCC GGGCGACGAG GGCGCCGAGC CCGGCGCCAG CCGGCGCGCG
CCCTCCGACG ATCCCGCGAG CCTCGACGCG CCGCCGCTGC GCATGCCGGC GCCCGGCGAT
CCGCGCGTGC TCTACCAGCT CTCGTTTCCC GCGCCGCAGA CCCATTACGT CGAGGTCGAG
GCCGTGATCC CGGTGCCCGC GGCCGCGACC GAAGCCGAAG CCGAAGCCGG GGAGGGCGAC
GGCGCCGCCG CGGCCGATAG CGCACCGGGC GACGCCATGG ATCTGTTCAT GGCGGTGTGG
ACGCCGGGTT CGTATCTGGT GCGCGAGTTT TCGCGTCACG TCGAGGACCT GCGCGTGAGC
ACGCCCGCGG GCGCGACCCT GGCGGTCGAC AAGGTGCGCA AGAACCGCTG GCGGGTGCGT
CTGCTGGGCA ACAAGGTCAA GAAGCGGCCC GAGCATGTGG TGGTTCGCTA CCGCGTGTAC
GCGCGCGAGA TGAGCGTGCG CACCAGCTTT GTCGACGCCG ACATCGCCGT GCTCAACGGC
GCCTCGCTGT TCGTGAGCGC GCTCGGCGGG CAAGCGCTGC CGCACGAGGT CCGGCTCAGC
TTGCCGGCGG CTTGGTCGGA CAGCGTGACC GGCATGCCGG CGCACCCCGA GGGCGCGCCG
CATCACTATC TGGCCGAGGA CTACGACGCG CTGGTCGATG CGCCCATCGT CGCCGGCAAC
CCCACGCTGC ACAGCTTCGA GGCCGGCGGC GCCAACCACC GCATCGCCAC CTTCCTGAGC
GACGAGCGCT GGGACGGCGA GCGCGTGGCG GCCGACATCG AGACCCTGGT GCGCGCTCAG
ATCGACTTCT GGCGCCAGGT GCCGTATCGC GACTACGTGT TTCTCGCCGT GCTCTCGGGC
ACCGGCGGCG GGCTCGAGCA CGGCAACTCG ACCCTGATGA TGGGCGACCC CTGGCTCACG
CGCGAGCGCG ACAGCTACCT GCGCTGGCTC GGGCTGGCGA GCCACGAGTT CTTTCACACC
TGGAACGTCA AGCGGCTGCG GCCGGTGGCT CTGGGCCCCT TCGACTACGA GAGCGAGGTC
TACACCGAGT CGCTGTGGGT CGCCGAAGGC ATCACCTCGT ATTACGCGGA CCTGCTGCTG
CGCCGCGCCG GCCTCATCGA TGACGCCGGC TACCTGCGCA ATCTGTCGCG GCGGCTGGGG
CAGGTGCAGC GCGTGCCCGG GCGCCTGGTG CAGCCGCTGG CGGCCAGCTC CTACGACGCC
TGGATCAAGT TCTATCGCAA CGACGAGAAC AGCGACAACA GCAGCGTGAG CTACTACAGC
AAGGGCGCCC TGGTCGGCTT CCTGCTCGAC GCCGAGATCC GCCGCCAGAC CCGGGGCACG
CGCAGCCTCG ACGACCTCAT GCGCCTGGCC TACGCGCGCT ACGCGGGCGA GCGCGGCTTC
ACCGAGGCCG AGTTCCGGGC GCTGGCCGGC GAGATCGCGG GCGCCGATCT GTCGGCGTTT
TTCGACCAGA CGGTCGACAG CGCGGCCGAG CTGTCCTTCG AGCCCGCGCT CGAGTACTTC
GGCCTCACCA TGGGCAGCGG CGACGACGCC GCCGCCGGCA GCGCCGACGA GCCCGCGGGC
TGGCTGGGCG CGAAGCTGCG CGAGGACGGC GGACGCTCGC TGGTGAGCGA GGTGCCGCGC
GATACCCCCG CGCACCGCGC CGGCGTCAAC GTCGGCGACG AGCTGCTGGC CATCGACGAG
CGCCGCATCT CCAGCGACGG CCCCGATGAT GTATTGCGCT ACCTGCGGCC GGGCGAGCGA
GTCGAGCTGC TGGTCGCGCG CCGCGAGCGG CTGCGGCGCC TGGCTGTGAC GCTGGGCGAT
AAGCCCGATG AGGAGTGGAA GCTGGCGCTG GCGCCGCGTC CCAGCAACGA TCAGGCGCGC
CGGCGCGGCC GCTGGCTGTC GGGGTTATGA
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| Protein sequence | MQRHPGGRSK RSAAPARSRL PRVAILGIAF ALSLGTACRG GGASAPPGDE GAEPGASRRA
PSDDPASLDA PPLRMPAPGD PRVLYQLSFP APQTHYVEVE AVIPVPAAAT EAEAEAGEGD
GAAAADSAPG DAMDLFMAVW TPGSYLVREF SRHVEDLRVS TPAGATLAVD KVRKNRWRVR
LLGNKVKKRP EHVVVRYRVY AREMSVRTSF VDADIAVLNG ASLFVSALGG QALPHEVRLS
LPAAWSDSVT GMPAHPEGAP HHYLAEDYDA LVDAPIVAGN PTLHSFEAGG ANHRIATFLS
DERWDGERVA ADIETLVRAQ IDFWRQVPYR DYVFLAVLSG TGGGLEHGNS TLMMGDPWLT
RERDSYLRWL GLASHEFFHT WNVKRLRPVA LGPFDYESEV YTESLWVAEG ITSYYADLLL
RRAGLIDDAG YLRNLSRRLG QVQRVPGRLV QPLAASSYDA WIKFYRNDEN SDNSSVSYYS
KGALVGFLLD AEIRRQTRGT RSLDDLMRLA YARYAGERGF TEAEFRALAG EIAGADLSAF
FDQTVDSAAE LSFEPALEYF GLTMGSGDDA AAGSADEPAG WLGAKLREDG GRSLVSEVPR
DTPAHRAGVN VGDELLAIDE RRISSDGPDD VLRYLRPGER VELLVARRER LRRLAVTLGD
KPDEEWKLAL APRPSNDQAR RRGRWLSGL
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