Gene Hoch_3300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3300 
Symbol 
ID8545688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4552808 
End bp4553626 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content72% 
IMG OID646387967 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003267695 
Protein GI262196486 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.605078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.514892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGATC TGCGACAGCA TCACGCCCTG GTAACCGGCG CATCGAGCGG GATCGGACGC 
GAGATCGCGC GCCTCCTGGC GAGCTGGGGC TGCGCGCTCA CCCTCACCGC GCGCCGCGAC
GATCGCCTGC GCGAGCTGGC CCGCGAGCTC GGCCCCAGCG GCGTCGAGGT GCGCTGGGTG
TGCTGCGATC TGGCCGCGCC CGAGGGCGCG CGCGCGCTCT TCGAGGACGT CGAGCGCAGC
GGCCAGCGCG TCGACATCCT GGTCAACAAC GCCGGCTTTG GCCGCTACCA GCGCTTCGAG
GACATCCCCT GGGGCGAGCA CGCGGCCATG CTGCAGCTCA ACGTCACCGC ATTGGTCGAG
CTCACCCACC GCTTTCTGCC CGCGATGTTG CTCAGCGAGC GGCCCGCCTA CGTGCTCAAC
GTGGCCTCCA TCGCCGCTTA CCAGCCGGTG CCGTTTTTCG CCGCCTACGC CGCCAGCAAG
TCCTTTGTCC GCGACTTCTC CGAGGCGCTC GCGGTCGAGC TCGCCGACAC CAACCTGCGC
GTGAGCTGCC TGTGCCCGGG CGGCACGCAC ACCGAGTTCG CCGAGCACTC GGGCCAGCAG
CTCGGACGCC TGGCCCAGGC CTCGATGCTG GACGCGCGCG AGGTCGCCGA GCGCGGCCTG
CGCGCCATGC TGCGCGGTCG TCCGTGTGTG GTCACCGGCT GGATGAACGT GCTCTCGACC
TTTCTCATGC GCTTCTTGCC GCGCCGCGCC GCCGCCGCCG GCTCCGTGGC CGTGCTCGGC
CTGCCGCCGG ACGAGAGCGG CCCCGACGAG ACCCGCTGA
 
Protein sequence
MPDLRQHHAL VTGASSGIGR EIARLLASWG CALTLTARRD DRLRELAREL GPSGVEVRWV 
CCDLAAPEGA RALFEDVERS GQRVDILVNN AGFGRYQRFE DIPWGEHAAM LQLNVTALVE
LTHRFLPAML LSERPAYVLN VASIAAYQPV PFFAAYAASK SFVRDFSEAL AVELADTNLR
VSCLCPGGTH TEFAEHSGQQ LGRLAQASML DAREVAERGL RAMLRGRPCV VTGWMNVLST
FLMRFLPRRA AAAGSVAVLG LPPDESGPDE TR