Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3300 |
Symbol | |
ID | 8545688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 4552808 |
End bp | 4553626 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 646387967 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003267695 |
Protein GI | 262196486 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.605078 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.514892 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGATC TGCGACAGCA TCACGCCCTG GTAACCGGCG CATCGAGCGG GATCGGACGC GAGATCGCGC GCCTCCTGGC GAGCTGGGGC TGCGCGCTCA CCCTCACCGC GCGCCGCGAC GATCGCCTGC GCGAGCTGGC CCGCGAGCTC GGCCCCAGCG GCGTCGAGGT GCGCTGGGTG TGCTGCGATC TGGCCGCGCC CGAGGGCGCG CGCGCGCTCT TCGAGGACGT CGAGCGCAGC GGCCAGCGCG TCGACATCCT GGTCAACAAC GCCGGCTTTG GCCGCTACCA GCGCTTCGAG GACATCCCCT GGGGCGAGCA CGCGGCCATG CTGCAGCTCA ACGTCACCGC ATTGGTCGAG CTCACCCACC GCTTTCTGCC CGCGATGTTG CTCAGCGAGC GGCCCGCCTA CGTGCTCAAC GTGGCCTCCA TCGCCGCTTA CCAGCCGGTG CCGTTTTTCG CCGCCTACGC CGCCAGCAAG TCCTTTGTCC GCGACTTCTC CGAGGCGCTC GCGGTCGAGC TCGCCGACAC CAACCTGCGC GTGAGCTGCC TGTGCCCGGG CGGCACGCAC ACCGAGTTCG CCGAGCACTC GGGCCAGCAG CTCGGACGCC TGGCCCAGGC CTCGATGCTG GACGCGCGCG AGGTCGCCGA GCGCGGCCTG CGCGCCATGC TGCGCGGTCG TCCGTGTGTG GTCACCGGCT GGATGAACGT GCTCTCGACC TTTCTCATGC GCTTCTTGCC GCGCCGCGCC GCCGCCGCCG GCTCCGTGGC CGTGCTCGGC CTGCCGCCGG ACGAGAGCGG CCCCGACGAG ACCCGCTGA
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Protein sequence | MPDLRQHHAL VTGASSGIGR EIARLLASWG CALTLTARRD DRLRELAREL GPSGVEVRWV CCDLAAPEGA RALFEDVERS GQRVDILVNN AGFGRYQRFE DIPWGEHAAM LQLNVTALVE LTHRFLPAML LSERPAYVLN VASIAAYQPV PFFAAYAASK SFVRDFSEAL AVELADTNLR VSCLCPGGTH TEFAEHSGQQ LGRLAQASML DAREVAERGL RAMLRGRPCV VTGWMNVLST FLMRFLPRRA AAAGSVAVLG LPPDESGPDE TR
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