Gene Hoch_3289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3289 
Symbol 
ID8545677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4534223 
End bp4535311 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content68% 
IMG OID646387956 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_003267684 
Protein GI262196475 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00196526 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.178357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAGC TATTCGAGCC CTATCAACTC CACGATCTCT CCCTCAAGAA CCGCATCGCC 
CTGGCGCCGA TGACGCGCAG CCGGGCCGGC AAAGAGCGTC TGGCCAACCC GATCATGGCC
GAGCACTACG CGCAGCGCTG CGGCGCCGGC CTGCTGATCA CCGAGGCCAC CACGGTCTCG
ACCCAGGCCA ACGGCTGGGA CCAGTCGCCC GGCATCTACA CCCGCGCGAT GAGCGATAGC
TGGAAGCAGG TGGTCGAGGC CGTGCACGCG CAGGGCAGCC GCATCTTCCT GCAGCTCTGG
CACACCGGCC GCGCCTCGCA CAGCAGCTTT CACGACGGCG CGCTACCGGT CGCTGCCTCG
GCCATCAAGA TCGAGGGCTC GGGCGCGCAC ACGGCCACCG GCAAGCAGCC GCACGAGGTC
CCGCGCGCAC TCGAAACCGC CGAGATTCCC GGCGTCGTGG ACGACTTCCG CAAGGCCGCC
CAGTACGCCA AGGACGCCGG CATGGACGGC GTCGAGCTGC ACGCCGCCAA CGGCTACCTG
GTCGACAACT TCTTGCAGTC GAAGACCAAC CACCGCGACG ACATCTACGG CGGCAGCGTC
GACAACCGCA CCCGCTTCCT CAAGGAGATC GTCGAGGCGC TGTGCACCGT GTTTCCGTCC
AACCGGGTCG GCGTGCGCCT GTCGCCGAAC GGCGTGTACA ACGACATGGG CTCGCCCGAC
TTCCGCGAGC AGTTCGCCCA CGCGCTCAGC GTCCTCGACG GCTTCGACCT GTGCTACGCG
CACCTCATGG ACGGCCTGGC CTTTGGCTTC CACAAGCTGG GCGAGCCCTT CACCCTGGCC
GACGCGCGCA AGAGCTTCCG CGGGCCGCTC ATCGGCAACT GCGGCTACAC CCAGGAAGAC
GCCGAGGCGC GCATCGACGC CGGCGAGGCC GACATGATCG CGTTCGGTCG CCCCTTCATC
AGCAACCCCG ACCTGGTCGA GCGCATGCAG AACGGCTGGC CCCTGGCCGG AGACGCCAGC
TTCGAGCAGA TGTACGCGCC CACGGGCGCC GTCGGTTACA ACGACTTCCC CGCCTATCAG
AAGTCCTGA
 
Protein sequence
MSKLFEPYQL HDLSLKNRIA LAPMTRSRAG KERLANPIMA EHYAQRCGAG LLITEATTVS 
TQANGWDQSP GIYTRAMSDS WKQVVEAVHA QGSRIFLQLW HTGRASHSSF HDGALPVAAS
AIKIEGSGAH TATGKQPHEV PRALETAEIP GVVDDFRKAA QYAKDAGMDG VELHAANGYL
VDNFLQSKTN HRDDIYGGSV DNRTRFLKEI VEALCTVFPS NRVGVRLSPN GVYNDMGSPD
FREQFAHALS VLDGFDLCYA HLMDGLAFGF HKLGEPFTLA DARKSFRGPL IGNCGYTQED
AEARIDAGEA DMIAFGRPFI SNPDLVERMQ NGWPLAGDAS FEQMYAPTGA VGYNDFPAYQ
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