| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3281 |
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| Symbol | |
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| ID | 8545669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4525018 |
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| End bp | 4526307 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646387948 |
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| Product | cysteine desulfurase, SufS subfamily |
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| Protein accession | YP_003267676 |
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| Protein GI | 262196467 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.30955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0478783 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCCCT CCGCCACGCG CCCTACGCCC GCCAGCTCTG CCGCGACGCC GCCCTCTGGC
GCGTCGCGCG CCTCCTTCGA TGTCCAGCGC ATCCGCGCCG ACTTCCCGGC TCTCGCGCAG
GAGGTCCGCG GCAAGCCGCT GGTGTACCTC GACAGCGCGG CCACCGCGCT CAAGCCGCAG
CCCGTGATCG ACGCGGTGGT GCGCATCTAC GCCCGCGACT GCGCCAACGT GCACCGCGGC
GTGCACACCC TCAGCCAGCG CGCCACCGAG GCCTACGAGG GCACGCGCGA CACGATCCAG
CGCTTCCTCG GCGCCGAAGC CCGCGAGGAG ATCGTCTATA CCCGCGGCAC CACCGACGCC
ATCAACCTGG TGGCGCAGTC GTGGGCGCGC CCGCGCCTCG GTCCCGGTGA CGAGATCCTC
ATCACCGGCC TCGAGCACCA CGCCAACATC GTGCCCTGGC AGATGGTGTG CGAGCAGACC
GGCGCCAAGC TGGTCGTCGT CCCGGTGTCC GACGACGGCA GCATCCAGGT CGAGGACGTC
GCCGCCAAGC TCGGCGAGCG CGTGCGCCTG GTCGCCATGT CGCACGTCTC CAACGCCCTG
GGCACCATCC TGCCGGTGCG CGAGGTCGCC GCCCTGGCCC GCGATCGCGG CGCCCGGGTG
CTGGTCGACG GCGCCCAGGC CGTGCCCCAC CTGCCGGTCG ACGTGCGCGC GCTGGGCTGC
GATTTCTACT GCTTTAGCGC CCACAAGCTG TACGGCCCCT CGGGCGCCGG CGCGCTGTGG
GCGCCGCGCG CGCTGCTCGA GGAGATGCCG CCGTATCAGG GCGGCGGCGA CATGATCCGC
ACCGTGAGCT TCGAGCGCAC CACCTACGCC GATGTGCCGC AGAAGTTCGA GGCCGGCACC
CCGAGCATCG CCAGCATCGT CGGCCTGGGC GCGGCCATCG ACTACATCAG CGCCATCGGC
TGGGACGCCA TCTTGGCCCA CGAGAGCGAT CTGCGCGGCT ACGCCAGCGA GCGCCTGGGC
GAGATTCCCG GCCTGCGCAT CCTCGGCACC ACGGCGGAGA AGATCGCCGT GCTCTCGTTC
ACCATGGACA GCGCCCACCC GCACGATATC GGCACCATCG TCGATACCCA CGGCGTGGCC
ATCCGCACCG GCCACCACTG CGCGCAGCCG GTCATGGAGC GCTTCTGCGT ACCGGCGACC
GCGCGCGCCT CCCTCGGTCT CTACAACACC CGCGCCGATA TCGACGCCTT GATGGGCGCG
CTCCGCGACG TCCAGGAGAT GTTCGGATGA
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| Protein sequence | MTPSATRPTP ASSAATPPSG ASRASFDVQR IRADFPALAQ EVRGKPLVYL DSAATALKPQ
PVIDAVVRIY ARDCANVHRG VHTLSQRATE AYEGTRDTIQ RFLGAEAREE IVYTRGTTDA
INLVAQSWAR PRLGPGDEIL ITGLEHHANI VPWQMVCEQT GAKLVVVPVS DDGSIQVEDV
AAKLGERVRL VAMSHVSNAL GTILPVREVA ALARDRGARV LVDGAQAVPH LPVDVRALGC
DFYCFSAHKL YGPSGAGALW APRALLEEMP PYQGGGDMIR TVSFERTTYA DVPQKFEAGT
PSIASIVGLG AAIDYISAIG WDAILAHESD LRGYASERLG EIPGLRILGT TAEKIAVLSF
TMDSAHPHDI GTIVDTHGVA IRTGHHCAQP VMERFCVPAT ARASLGLYNT RADIDALMGA
LRDVQEMFG
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