Gene Hoch_3272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3272 
Symbol 
ID8545660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4508382 
End bp4510217 
Gene Length1836 bp 
Protein Length611 aa 
Translation table11 
GC content71% 
IMG OID646387939 
ProductProtein-disulfide reductase 
Protein accessionYP_003267667 
Protein GI262196458 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4232] Thiol:disulfide interchange protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0226485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAAC GCCTCCCCCC AGTCCTCGCC GCCCTCCTCG TCTTGTTGGT ACCCGCCCTG 
GCATTTGCCC AGGGCGGCGG CTTTGAGGAC CAGCTCGCGC GGGGCTGGCT GTGGGCCCAC
CTCGCGGTCT TCGGGGCCGG CTTCCTCACC TCGCTCACGC CCTGCGTGTA CCCGATGATC
CCCATCGTGG TCGGCGTGTT CGGCGCCCGC GACGAGGACG TCACCCGGCA GAAGGCCTTC
GCCCTGGCCT CGGCCTACGT GCTCGGCATG GGCGCGATGT ACGCGGTCCT GGGCATCGTG
TTCGCGCTCA TCGGCAAGCA GTTCGGCTCG ATCCTGTCCG ATCCCAAGGT GGTGTTCCCC
ATCGTCGCCC TGTACCTGGC GCTGGCGGCG TCGATGTTCG GGGCCTTCGA GCTCAATCTG
CCGGCCTCCT TGCAGGCCCG GCTCAGCCGC GTGGGCGGCC GCGGCTACGG CGGCGCCTTC
GGCATGGGCC TGGTCGGCGG CCTGACCGCG GCGCCGTGCA CCGGCCCGAT CCTGGTCGGC
ATCCTCGGCT ACGTGGCCAC CACCCGCGAT GTGGTCGCCG GCGCCAGCCT GCTGTTCACC
TACGCCATCG GCATGGGCGT GCTGTTCTGG CTCCTGGCCG CCTTCACCGT GTCGCTGCCC
AAGAGCGGCC GCTGGATGGA GAGCGTCAAG AGCTTCGGCG GCATCGCGCT GCTGGCGGTG
AGCATCTTCT TCCTGCGCCC GATCTTCCCG GCCATCGCCG AGTTCGGCGG CAGCGAGCTG
AGCGTCCTGG CGCTGGCCAT CGGTCTGATC GTCCTGGGCA TCGCGCTCGG CGCCATCCAC
CTGTCGTTCC ACGCCGGCTG GCCGGTGCGC ATCCGCAAGG GCCTGGGCGT GCTGTTCACG
GTCGTGGGCC TCACCCTGGC GGTCAACTGG ACGCTCAGCG CCGAGCGCGA GCTGCCCTGG
CACTATGACG AGCAGGCGGC CTTTGCCGCG GCCGAGGCCG AGGACAAGGG CGTGATGATC
GACTTCGCGG CCGACTGGTG CACGCCGTGC GCCGAGCTCG AGCTCACCTT TGCCACGGAC
GAGGTCTACG AGGCGCTGAG CGAGGACTAC GTGTTCCTCA AGTTCGACGT GAGCAAGGGC
ACCGAGGAGG ACGAGGCCAA GCAGGAGAAG TGGAACGCCG AGACCCTGCC GGCCGTGGTC
TTCACCGACG CGGCGGGTGA GGAGCTGGGC CGGGTGAGCG AATACCTCAA GCCTGCACCT
TTCCTCGCGG TGGTCCACGC GGCCAGCGCC AAGCTGCGCG GGCACGAGCC CGAGGCCGCG
GCCGCGACGC CGGCTGCAGC GGCCGAGCTG GCCGCGGTGG CCGCCGAACC GGCCGCGGCG
CAAGCCAGCG CTGACGATAT CGCCGTGCCC GCCGCCGGCG CCGCGACGGT CAAGGGCGCC
GCGGAGGACA CGGCCGACAA GGCCGAGGTC AAGATCGAAG GCCACGGCGA GCTGAGCTGG
CGCACCGACG AGCGCGCGGC CTTTGCCGAG GCGGCGGCGA CCGGCAAGCG CGTGGTGGTC
GACTTCCACG GCACCTGGTG CACGGGCTGC GTGGAGATGG ACGAGAACGC GTGGTCCGAG
CCGGCGGTCG CCAGCGTCAT CGACGAGGCC TTTGTACCGC TGCGCCTCGA CGTCACCGAG
GGCAACCCGG CCGACGAGGC CCTACAGGCC AAGTACGCGG CCGACAGTCT GCCGATGGTA
ATCGTGGTCG ACACCGAGGG CGTGGAGCAC GGCCGCCTGG CCGGCGCGGC CAGCTCGACC
GATCTCATCG GCCTGCTCAC CACCTGCTCC TCGTAG
 
Protein sequence
MPKRLPPVLA ALLVLLVPAL AFAQGGGFED QLARGWLWAH LAVFGAGFLT SLTPCVYPMI 
PIVVGVFGAR DEDVTRQKAF ALASAYVLGM GAMYAVLGIV FALIGKQFGS ILSDPKVVFP
IVALYLALAA SMFGAFELNL PASLQARLSR VGGRGYGGAF GMGLVGGLTA APCTGPILVG
ILGYVATTRD VVAGASLLFT YAIGMGVLFW LLAAFTVSLP KSGRWMESVK SFGGIALLAV
SIFFLRPIFP AIAEFGGSEL SVLALAIGLI VLGIALGAIH LSFHAGWPVR IRKGLGVLFT
VVGLTLAVNW TLSAERELPW HYDEQAAFAA AEAEDKGVMI DFAADWCTPC AELELTFATD
EVYEALSEDY VFLKFDVSKG TEEDEAKQEK WNAETLPAVV FTDAAGEELG RVSEYLKPAP
FLAVVHAASA KLRGHEPEAA AATPAAAAEL AAVAAEPAAA QASADDIAVP AAGAATVKGA
AEDTADKAEV KIEGHGELSW RTDERAAFAE AAATGKRVVV DFHGTWCTGC VEMDENAWSE
PAVASVIDEA FVPLRLDVTE GNPADEALQA KYAADSLPMV IVVDTEGVEH GRLAGAASST
DLIGLLTTCS S