Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3253 |
Symbol | |
ID | 8545641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 4484562 |
End bp | 4486832 |
Gene Length | 2271 bp |
Protein Length | 756 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 646387920 |
Product | CheA signal transduction histidine kinase |
Protein accession | YP_003267648 |
Protein GI | 262196439 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0312912 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0661628 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAGCG ACAAGCTCCT CGCCGGGCTG CGCGCGGTCT TCCGCGATGA ACTCGAAGAC CACCTGACCA CGCTCGAGCG CGAGACCGTG ACCCTGGCGC GCGCCGAGAC CACGCCCGAG ACCATCTACG CCGCGGTGCG CGAGATCTTC CGCGCGGTGC ACAGCCTCAA GGGCGCTGCC CGGGCCGTGG ACTATCCCGT GCTCGAGCGC ATCTGCCACT CGCTCGAGAG CAGCCTGGTC CATATCCGCG CGCCCAGCCC CGACATCAAC GCCGAGTCGG TGCGCGTGGC CACCGAGCGC ACCATGGCCG CGATCCTGTC GTGGAGCGCC GAGCACCTCA ACAAGACCGT GCGCTTCCAG GCGCCGGGCG CGGCAACCGA AGCGCCCGCC GCGGCCGCCG CGACCACAGC GCCGCCGCGC GGGCCAGCGC CGGCTCCCCC GCCCCGGAGT GAGCCGACCC CGGCGCCCGC GCCCGCGCCT GCCCCCGCGC CCGCGTCCGG CAGCGCGCCC CGGCGCTCGA CCACGCTGCC GCCGGCCGAC GAGGCGCCGA CCGGGCGCTC GAGCACGCAC ACCACGGATA CCGTCCGGGT GTCCGCCGAA CGCGTCGGCC GCATCCTGGT ACAGACCGAG GAGCTGGTCG CGCTGTCGGT GCGCGGCGCC CGCGCGCGCA CGGGCTTTGC CTCGTTTGGC GACACCCTGG CCGAAATGCG CCGGCAGCTC GACATCGCCC GGCGCGCGGT GCGCCACCAG CCGGTCGCGG TCAGGGCCAT CGAGAGCGCC CAGTCGGCGG TGCAGACCCT GTCGGTGTGG TCGCTCGAGG CGCGCCGCCG ACACACCGTC GACTGGGACG ACGCGGTGAC CAAATCCGCG GCCCTGGCCC ACGATACCCG GCTGTTGCGC CTGGTGCGCG TCGACAGCCT GCGGCCGGTG CTCGAGCGCA CGGTCATCGA GACCGCGCGC AGCCTGGGCA AGGTGGTCAG CTTCGCGTTC GAGGGCGGCG ACGCGGAGTT CGACCGCCGC GTCATCGAGC GCCTGCGCGA CCCGCTCATC CAGATGATGC GCAACGCCTG CGACCACGGC ATCGAGTCCG CCGAGCAGCG CACCCGGGCC GGCAAAGCGC CGGCCGGACG CATCGCGTTC AGCGCCCGCA CGAGCGGCGC CGACGCGGTC ATCACAGTGC GCGACGACGG CCGCGGCATC GACGTCGAGC GCGTGCGCCG CGCCGCCCGC AGCCGCGGCT ACGCGGTGGA CGAAAACGAC GAGCAGGCGC TTCTCGACCT GGTCCTGCGC CCGGGCTTCA GCACCAAGCG CGAGGCCTCC GAGACCTCGG GGCGCGGCAT CGGCCTCGAC ATCGTGCGCA AGCGCGTGGC CGAGATGCAG GGCCGGCTCA CCATCGAGAC CAAGCCCGGC GAGGGCACCG CCATCCACCT GCGCGTGCCC GGCGACCTCG GCATCATGCG CGGCCTCTTG GTCCATGCCC GCGGCTCCTC CTTCATTCTG GTACAGAGCG CCATCGAGAC CATGCTGCGC GTGCGTCCCG ACGACGAGCA GACCATCGGC GGCAAACGCC ATATCCACTA TCAGGGCACG GCGATTCCGC TCACCGATCT CGGCACCGCC CTGGGCCTGG CCGGACGCGG CCGCAACGAC GAGGCCGAGG CGCGTCCCTG CGTGGTCCTG GCCTCGGCCG AGCGCCGCGT GGCGTTCTTG GTCGACGCCT TCGGCGACCT GCGCGACGTG GTCATCAAAC CGCTGGGCCC GCGCGTGCGG CGGGCCGGTT TCGTCACCGG CGCGGCCCTG CTCGGCGACG GCGAGATCGC CTGCGTTCTC AACGCCTTCG ACCTGGCCGA AGTCAGCCGT GCGGAAAACC AGGAGATGGT GCGCGAACAA AGCGTCGAGC GCCAATACAC CTTGTTGGTC GTCGATGACT CGGTAACCAC GCGCCAGCTC TTGCGCTCGA TCCTCGAGGC GGCTGGCTAC CAATGCGAGG TCGCGCCCGA TGGCGAAGCG GCCTGGAGGC GGCTGCTCAT GGGCGATCCC ATCGATCTCA TCGTCTCGGA CATAGAGATG CCCAGGCTCG ACGGATTTCA GCTGCTTTCG CGCGTGCGCT CGTCGCCAAA AACCGCCAAA TTACCATTCG TGTTGGTCAC GGCGTTATCC GACGACGGCG ACCGGCGTCG GGCCCTCGAG CTCGGCGCCG ACGCCTACGA GATCAAAGGC CATTTTGATC AAGACGCGCT GCTCGACACC ATCGAGGAGC TACTGCCATG A
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Protein sequence | MDSDKLLAGL RAVFRDELED HLTTLERETV TLARAETTPE TIYAAVREIF RAVHSLKGAA RAVDYPVLER ICHSLESSLV HIRAPSPDIN AESVRVATER TMAAILSWSA EHLNKTVRFQ APGAATEAPA AAAATTAPPR GPAPAPPPRS EPTPAPAPAP APAPASGSAP RRSTTLPPAD EAPTGRSSTH TTDTVRVSAE RVGRILVQTE ELVALSVRGA RARTGFASFG DTLAEMRRQL DIARRAVRHQ PVAVRAIESA QSAVQTLSVW SLEARRRHTV DWDDAVTKSA ALAHDTRLLR LVRVDSLRPV LERTVIETAR SLGKVVSFAF EGGDAEFDRR VIERLRDPLI QMMRNACDHG IESAEQRTRA GKAPAGRIAF SARTSGADAV ITVRDDGRGI DVERVRRAAR SRGYAVDEND EQALLDLVLR PGFSTKREAS ETSGRGIGLD IVRKRVAEMQ GRLTIETKPG EGTAIHLRVP GDLGIMRGLL VHARGSSFIL VQSAIETMLR VRPDDEQTIG GKRHIHYQGT AIPLTDLGTA LGLAGRGRND EAEARPCVVL ASAERRVAFL VDAFGDLRDV VIKPLGPRVR RAGFVTGAAL LGDGEIACVL NAFDLAEVSR AENQEMVREQ SVERQYTLLV VDDSVTTRQL LRSILEAAGY QCEVAPDGEA AWRRLLMGDP IDLIVSDIEM PRLDGFQLLS RVRSSPKTAK LPFVLVTALS DDGDRRRALE LGADAYEIKG HFDQDALLDT IEELLP
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