| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3250 |
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| Symbol | |
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| ID | 8545638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4478192 |
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| End bp | 4482238 |
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| Gene Length | 4047 bp |
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| Protein Length | 1348 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646387917 |
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| Product | signal transduction histidine kinase with CheB and CheR activity |
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| Protein accession | YP_003267645 |
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| Protein GI | 262196436 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.534329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0270765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGAAC AAGAACGCCC GCCGTCGGAC GGCGATACCG ACCGGCAAAC GCCAGCGCAG
GACGGGGCTG ACGAGCAGCT CTACGTCGTC GGTGTCGGCG CGTCTGCTGG AGGTCTCGAG
GCGCTCGAGA CCCTGTTCGG GGCCATGCCC CTCGACAGCG GCATGGCGTT CATCGTCCTG
CAGCACCTCT CGCCCGACTT CGAGAGCCAC ATGGACGAGC TGCTCGGGCG CAAGACCGAC
ATCCCGATCC GTCGCATCCG CAACGGCATG CGCGTCCGGC CCAACGAGAT CTATCTGGCG
CCGGCCAAGC AAGAGATGAT CATCAGCAAC GGGACCCTGC TCTTGACCGA GCGCGATCCC
ACCCAGGGCT TCACGCTCCC CATCGACCAC TTCTTCCGCG CGCTGGCCCA TGACGCCGGC
ACCAACGCCA TCGGCATCGT GCTCTCGGGC ACCGGCAGCG ACGGCTCGCG CGGCATCCGC
GAGATCCACG CCGCCGGCGG GCTGGTGCTC AGCCAGAGCG AGGAGAGCGC CAAATTCGAC
GGCATGCCGC GCAGCGCGCA GAAGACCGGC GTGGTCGACG CGGTGTTGCA CCCCGAGCTG
ATGCCCGAGC GGCTGATGCT GCACGCCGCC CGCGACCCCT CACAGCCGCT CTCGAGCGTG
GTTTTGCCCG GCCCCGAGCA GACCGGCATC GACATGATCC TGCGGCTGCT TCGCGACGAG
TACGGCATCG ACTTCGCCTA CTACAAGCCC AACACCGTGG CCCGCCGGGT CGAGCGCCGC
ATCTCGATGG CCTCCTCGGT CGACATCGCC GACTACGTCG AGCACCTGCG CAGCAACCCC
GAGGAGCTGT CGGCGCTCTA CCAGGATCTG CTGATCGGCG TCACCCGCTT CTTTCGCGAC
CCCGACGCCT TCGCCATCCT CGAGGAGCGG CTGCTGCCGC ACCTGCTCGA CACCACGCCC
GCGGGCGAGG AGCTGCGGCT GTGGGTGCCG GGCTGCGCCA CCGGCGAGGA GGCCTACACC
CTGGCCATCC TGCTGCACGA ACAGCTCACC GCGCGCGAGC GGCCGCTCGC GGTCAAGATC
TTCGGCACCG ACATCCACCC CGGCTCGCTC GAGGCGGCCG CGATCGGCCG CTACCCCGAG
CAGGCGCTGA GCGGTATGTC CGAAGAGCGG CGGCAGCGCT ATTTCCGCCC CGACGGCGAG
CAGCACGGCG AGGCCTACTT CCGCATCGCC AAGGAGCTGC GCCAGCTCAT CGTGTTCGCG
CGCCACAACG TCATGCGCGA CCCGCCGTTC ACGCGCCTGC ACCTCATCAG TTGCCGCAAC
GTGCTCATCT ACCTGCAGGC GGCCGCGCAG AAGAAGACCC TGTCGCTGTT CCACTTCGGA
TTGCGCACCG ACGGCATCCT GTTTCTCGGC CCCAGCGAGA CCCCCGGCTA CTTCGCCGAT
GAATACGAGG TGCTCGACAA GCGCTGGAAG ATCTTCCGCA AGCGCCGCGA CATCCGCCTG
CCGCTCGAGC CCAACCTGCC GACCCCGGTC TCCAGCCGCA CAGAGCGCCC GAATAGTCCG
CCGACGCCCT CGCTGGCCAA CCCCACCCTC GACCGCCGGC TGATCGAGAT CTACGACCGC
GTCCTCGCCA AGCACATGCC GCCGAGCTTG CTGGTCGACG AGCACTATCA CCTGGTGCAC
GCATTCGGCG GCGTCGAGCG CATCCTGCGG GTGCCCGCCG GCCGGGCCTC GGTCAACGTC
CTCGACCTGA TGCCGCAGTC GCTGCGCACA CCGCTCTCGG GCGCGCTGCA GCACGCCGGC
AAAGAGCGCG CGCCCATCCG CTACGTCGGC CTGCGCGCCG ACCTGGGCAC CGGTGAGGAG
AGCGTCCGCC TGGTGGTAGA GCCGCTCTAC AACGAGCGCG CCAAGACCAT GAACTTCCTG
ATCTCGGTGA CCCGGCACGA GACGCTGCCC GAGCCCGAAT CCGAGGCCGA CGATACCCAG
ATCGATCTCG ACCAGGTGAC CCAGGAGCGC ATCCGCACGC TCGAGGGCGA GCTGCGGCTC
AGCCGGGAAA ACCTGCAGGC CACGATCGAG GAGCTCGAGA CCTCGAACGA GGAGCTGCAG
GCCTCGAACG AGGAGCTGGT GGCCTCGAAC GAGGAGCTGC AGAGCACCAA CGAGGAGCTG
CACTCGGTCA ACGAGGAGCT GTACACGGTC AACGCCGAGC ACCAGAAGCA CATCGTCGAG
ATCACCGAGA TCAACAACGA CCTCGACAAC CTGCTGCACA GCATCGAGGT CGGCGTGGTG
TTCCTCGACG CCGAGCTGCG CATCCGCAAG TTCACCAGCG CCATCGCCGC CGCCTTCCAC
CTGCTGCCGC AGGATATCGG ACGGCAGTTC GATAACTTCG CGCACAACAT CGAGTACCCG
GCGCTGATGC GCGACATCAC CGCGGTGCGC GCCGGCGAGA CCACGATCGA GCGCGAGGTG
GTCAACCGCA GCGGCGACTT CTTCTTTCTG CGCATCCTGC CCTATCGCAG CGATAACACC
ATCACCGGCG TGGTGCTCAC GCTCATCGAC ATCGACGCGC TCAAGCGCAG CGAGGCCAAC
GTCCGCCAGC TCTCGGACAT CGTCACCTCG TCGACCGACG CCATCACCGC CGCCGACATG
CAGGGCCGGC TCACCGCCTG GAACGAGGGC GCGCAACAGC TCTACGGCTA CACGGCCGAC
GAGGCGCTGG GCATGCACCT CAACACCATG ATCCTGCCCG AATACCAGAG CGAGAACCGC
TCGTTCGTCG AGCGCGTGAG CCGCGGCGAG CAGATCGCGG ACGTCGAGAC CGTGCGCCTG
CGCAAAGACG GACACAAGGT CGAGATCTCG ATCTCGCTGT CGCCGCTGCG CGACGTGCAC
GGCGACATCG TCGGCGTCTC GAGCATCGCG CGCGACATCT CGCGGCGCAA ACGAGCCGAG
CGCCAGGTGC GGCGCGCCAT CGAGCAGCGC GACCACTTCC TGGCCACGCT CTCGCACGAG
CTGCGCAACC CGCTCATGGG CCTGCTCACG GCCACGCACA TCCTCCGCGA CGAGGACATG
CAGCCGGCCG CGCACCGGCG CGCGCTCGAC CTGATCGAGC GCCAGAGCCA GCAGATGGCG
CGCCTGCTCG ACGATCTGCT CGACGTCTCG CGCATGCGCC GCGACCGCAT CGAGATGGAC
AAGGCCCTCA TCGACATGCG CAAGGCCGTG CGCCCCGCGC TCGAGGCGGT CAGCGGCCGG
GCCCAGGACG CGGGCGTGAC CCTCGCGGCG GAGATGCCCG AGGAGCCGGT GTGGGTCTAC
GCCGACCGCA CGCGCCTGCA GCAGGTGGCC GCCAACCTGC TCGCCAACGC CATCAAGTAC
ACGCCGACGG GCAAGCGCAT CTGGGTCAGC ATCGTGCCCC AGGACGATGT CGCGCTGCTC
GAGGTGCGCG ACGAGGGCGT GGGCATCGCC ACCGAGCTGC AGGAGAGCAT CTTCGAGCCC
TTCATGCAGT CCGAAGAACC GCCGCGCGGC TGGGAGGGCG GCATGGGCCT GGGCCTGGCG
CTGGTGCGCT CGATCGCGCT GGCCCACGAG GGCTCGCTCG AGGTCAGCAG CGAGGGCCGC
GACCGCGGCA GCACCTTCAC CTTCCGCATC CCTATTTCGG ACACGGCGCC CGAGGAGCTG
CCGCAAAGCG ACACCGGCGA GATCCTCAAG CAGCGCGTCC TGCTCATCGA CGACGAGGAG
GACAACTGCA TGCTCCTGGC CGAGGCCCTG CGCTGCGGCG GCTTCGACGT CGTGGCCGCG
ACCACGGGCA CCGACGGCGC CCAGATGGCG CTCGACAATC CGCCCGACGT CGCCGTGGTC
GACATCGGCC TGCCCGACAT CTCCGGCTAC GAGGTGGCGC GCCGCATCCG CCGCAGCGCC
GCGGGCTCGC CCTACCTCAT CGCGCTCACC GGCTTCGGCC AGCAGCGCGA CCGCGAGGCC
GCGCGCGAGG CCGGCTTCGA CGAGCACCTG GTCAAGCCGA TCACGGCCGC GCTGCTGCGC
CGCGTGATCA ACCATAGACC GCGCTGA
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| Protein sequence | MEEQERPPSD GDTDRQTPAQ DGADEQLYVV GVGASAGGLE ALETLFGAMP LDSGMAFIVL
QHLSPDFESH MDELLGRKTD IPIRRIRNGM RVRPNEIYLA PAKQEMIISN GTLLLTERDP
TQGFTLPIDH FFRALAHDAG TNAIGIVLSG TGSDGSRGIR EIHAAGGLVL SQSEESAKFD
GMPRSAQKTG VVDAVLHPEL MPERLMLHAA RDPSQPLSSV VLPGPEQTGI DMILRLLRDE
YGIDFAYYKP NTVARRVERR ISMASSVDIA DYVEHLRSNP EELSALYQDL LIGVTRFFRD
PDAFAILEER LLPHLLDTTP AGEELRLWVP GCATGEEAYT LAILLHEQLT ARERPLAVKI
FGTDIHPGSL EAAAIGRYPE QALSGMSEER RQRYFRPDGE QHGEAYFRIA KELRQLIVFA
RHNVMRDPPF TRLHLISCRN VLIYLQAAAQ KKTLSLFHFG LRTDGILFLG PSETPGYFAD
EYEVLDKRWK IFRKRRDIRL PLEPNLPTPV SSRTERPNSP PTPSLANPTL DRRLIEIYDR
VLAKHMPPSL LVDEHYHLVH AFGGVERILR VPAGRASVNV LDLMPQSLRT PLSGALQHAG
KERAPIRYVG LRADLGTGEE SVRLVVEPLY NERAKTMNFL ISVTRHETLP EPESEADDTQ
IDLDQVTQER IRTLEGELRL SRENLQATIE ELETSNEELQ ASNEELVASN EELQSTNEEL
HSVNEELYTV NAEHQKHIVE ITEINNDLDN LLHSIEVGVV FLDAELRIRK FTSAIAAAFH
LLPQDIGRQF DNFAHNIEYP ALMRDITAVR AGETTIEREV VNRSGDFFFL RILPYRSDNT
ITGVVLTLID IDALKRSEAN VRQLSDIVTS STDAITAADM QGRLTAWNEG AQQLYGYTAD
EALGMHLNTM ILPEYQSENR SFVERVSRGE QIADVETVRL RKDGHKVEIS ISLSPLRDVH
GDIVGVSSIA RDISRRKRAE RQVRRAIEQR DHFLATLSHE LRNPLMGLLT ATHILRDEDM
QPAAHRRALD LIERQSQQMA RLLDDLLDVS RMRRDRIEMD KALIDMRKAV RPALEAVSGR
AQDAGVTLAA EMPEEPVWVY ADRTRLQQVA ANLLANAIKY TPTGKRIWVS IVPQDDVALL
EVRDEGVGIA TELQESIFEP FMQSEEPPRG WEGGMGLGLA LVRSIALAHE GSLEVSSEGR
DRGSTFTFRI PISDTAPEEL PQSDTGEILK QRVLLIDDEE DNCMLLAEAL RCGGFDVVAA
TTGTDGAQMA LDNPPDVAVV DIGLPDISGY EVARRIRRSA AGSPYLIALT GFGQQRDREA
AREAGFDEHL VKPITAALLR RVINHRPR
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