Gene Hoch_3206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3206 
Symbol 
ID8545594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4422429 
End bp4423082 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content75% 
IMG OID646387873 
Producthypothetical protein 
Protein accessionYP_003267601 
Protein GI262196392 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00578771 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACTGACC GCGCCGACAC ACTGCGCGCG CTCATGGCCA AGGCCGCGAT CCGGCCCGCC 
GAGAGCGCGC GCCCGGGCCC CCCCCCGCTG CGGGCGGAGG ACGCGCCGTG GTCGTGCGCG
TCGCTGTCCG GGCGCCTCAC CGAGCTCTCG GGCGTGGGCG CGGTGGCGTC CCTGACCTCG
GCCTTCGGGC TGGTGCTCGA CGCCCAGGCC CGCGCCGAAC CGGTGGCCTG GCTCACCCTG
CCCGAGACCT CATTCTACCC GCCCGACGCG GCCGAGAGCG GCATCGACCT CGACGCCCTG
GTGGTGGTCT GCGTGCCCGG CGCCAGCGAG GGCGCGCGCG CCGGCGAGCG GCTGCTGCGC
TCGGGCGCCT TTGGCCTGAT CGTGCTCGAC CTGGGCCGCG ATCCGCGCGT GCCCACGGCG
CTGCAGGGCC GCCTGGTGGG CCTGGCCAAG CGCCACGACA CCGCGCTGGT GTGCCTCACC
GACAAGAACC GCACCAGCGC CTCGCTCAGC TCGCTGGTGA CGCTGCGCGC CGAGGCGCTG
CGCACCCGCG ACGAGCACGG CTTTGCCTGT CGCCTCGAGG TCGTCAAGGA CAAGACCCGG
GGCCCCGGCT GGAACCATAG CGAGGTGGTC CGTGGACCGG ACGGCGTGCG TTGA
 
Protein sequence
MTDRADTLRA LMAKAAIRPA ESARPGPPPL RAEDAPWSCA SLSGRLTELS GVGAVASLTS 
AFGLVLDAQA RAEPVAWLTL PETSFYPPDA AESGIDLDAL VVVCVPGASE GARAGERLLR
SGAFGLIVLD LGRDPRVPTA LQGRLVGLAK RHDTALVCLT DKNRTSASLS SLVTLRAEAL
RTRDEHGFAC RLEVVKDKTR GPGWNHSEVV RGPDGVR