| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3178 |
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| Symbol | |
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| ID | 8545566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4378448 |
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| End bp | 4379611 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646387845 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003267573 |
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| Protein GI | 262196364 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.752007 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGTCCC CGTCTGAGTT AGAAATCGAC GTCGGTCAGT TACTTTGGTT CGGATATGAA
GGCGATTATC CGCCCGCGGA CATGCAGCGC GAGATCGCGG CGGGTCTGGT CGGCGGGGTG
CTGCTGTTCA AGCGCAACCT GCCCCCCGAG GACGAGCACT TCGCGCCGGC GCTGCGCGCG
ATCAACCGGC GCCTGCACCA GAGCGCAAGC GGCGACGCGA CGCCGCTGTG GATCGCCATC
GATCAGGAGG GCGGCACCGT GCAGCGCGTG CGCCAGCCGG GCACGGTGTG GCCGCCGATG
CTCAGCTTCG ACGCCCTGGC CGAGGCCCGC GGCGACCAGT ACGCCATCGC GCTGGCCGAG
CGCGTGGGCC TGGCCCTGGG CCACGAGCTG GCCGCGCTCG AGATCGACGT CGACTTCGCC
CCGGTGCTCG ATGTGCACAC CAACCCGGCC AACCCGGTCA TCGGCAAGCG CGCGCTGTCG
AGCGATCCCG AGCAGGTCGC GCAGCGCGGC CTGGCGCTGG CCCGCGGGCT GGAGCGCGCC
GGCGTGGTGA GCTGTGGCAA GCACTTCCCC GGCCACGGCG ACACCGACAC CGACAGTCAC
CTGGCGCTGC CGCGGCTCAC CCACGGCAGC GCGCGCCTCG ACGCGATCGA GCTGCTGCCC
TTCGCGCGCG CGGCCGCGGC CGACATACCG ATGATCATGA CCGCGCACGT GGTCTTTGCC
GCGCTCGACG ACACCGTGCC CGCGACCCTA TCGCACGCGG TCATCACCGG GCTGCTGCGC
AGGCGCCTGG GCTATCAGGG CCTGATCGTG AGCGACGATC TCGACATGCG CGCCATCGCC
GCGCACTTCG GCATCGGCGA GGCCGCGGTG ATGGCGGTGC GCGCGGGCTG CGACGTGCTG
CTGCTGTGCC GCGATCGCGC GCATCAAGAA GAAGCCCGCC GTGCGCTGCT CGAGGCCGCC
GCGCGCGACA GCGACATCCG CGCGGCCATC GCCGCGGCCG CCGCCCGCGT ACGCGCCGCC
AAGCGCGCTC ACGGCGAGCG CAGCCGCGGC CGCGAGCGCC CCGATCTCGA TGTGCTGGGC
TGCGCCGACC ACCTCGCCCT GGCCAGCGAG CTCGCCGCCG CGGGCGCGCA CGCGGCCGAG
CGCGATCCCA CCGAGCGCGG GTAA
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| Protein sequence | MQSPSELEID VGQLLWFGYE GDYPPADMQR EIAAGLVGGV LLFKRNLPPE DEHFAPALRA
INRRLHQSAS GDATPLWIAI DQEGGTVQRV RQPGTVWPPM LSFDALAEAR GDQYAIALAE
RVGLALGHEL AALEIDVDFA PVLDVHTNPA NPVIGKRALS SDPEQVAQRG LALARGLERA
GVVSCGKHFP GHGDTDTDSH LALPRLTHGS ARLDAIELLP FARAAAADIP MIMTAHVVFA
ALDDTVPATL SHAVITGLLR RRLGYQGLIV SDDLDMRAIA AHFGIGEAAV MAVRAGCDVL
LLCRDRAHQE EARRALLEAA ARDSDIRAAI AAAAARVRAA KRAHGERSRG RERPDLDVLG
CADHLALASE LAAAGAHAAE RDPTERG
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