| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3172 |
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| Symbol | |
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| ID | 8545560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4368163 |
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| End bp | 4369107 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646387839 |
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| Product | UspA domain protein |
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| Protein accession | YP_003267567 |
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| Protein GI | 262196358 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.356146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.679089 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTCC AACGCATTCT GATCCCGGTC GATTTCTCCT CGCAAGCCGA GCAGGCCAGC
GCGCTCGCCG TCGAGCTCGC CAACCGGCAC AGCGCCGAAG TCGTGCTGCT GCACGCCGAT
CCCCTGCCCG GCGCCGGCAC CATCGCGGTC GAGCCCGTGT ACATCCCGCC GAGCATGCTC
GCCGGCCTGC GCGCCACCTA CGATCAGGAC ATTCAGAACG CCTTCGCCGA GCTCGAGAAC
ACGCTGCGGC CGCAGCTCAA CGAGGGCGCC ACGCTGCGCA CCGAGCGCTG CCTGGCCTCG
CCGGTGGACG GGATCTTGGA GTTTGCCAAG GAGTGGGACG CCGACCTCAT CGTCATGGGC
TCGAGCGGCC TCAGCGGCAC CGCCCGCCTG CTGCTCGGCA GCACCGCCGA CAAGATCACG
CGCCACGCCC CCTGCCCGGT CCTGGTCACG CGCATGCAGG CGCCCGAGCA GCGGCCGCCG
CAGCCCTTCC GCCAGATCCT GGTCGGCATC GACCACTCGC CCTTTTCCGG CCCGCTCGCG
CGCCTGGCCA CCAGCGTGGT AGCGCCCGCC GGCGTCATCG AGCTGGTGCA CATCTGGTCG
CCGCCCTTCG TCTCCGTGCT CGGCACCCAC CTCGGCGGCA TCGAGACCAC CGAGTGGACC
ACGGCCCGGG AGGCGGTCAT CGGCGATGAG GCCAAGCGCC TCGAGGACTT TGCCCAGTCG
CTCGACCTCA GCGGCATCAA CTGCTTCATC GGCGCCGGCA ACGTGCCCGA CGCCCTGCTC
GACCGCGCCG ACGAGCACAA GGCCGATCTC ATCGTCGTCG GCGCCCACGG CCGCCGCGAG
CTGGGCGAGA AGCTCATCGG CACGGTCACC GACCGGCTGC TGCGCCACGC CCATCTCTCG
GTCCTGGTGC TGCCCGAGGG CGGCCTGCCG CGCTGGACCT TGTAG
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| Protein sequence | MRLQRILIPV DFSSQAEQAS ALAVELANRH SAEVVLLHAD PLPGAGTIAV EPVYIPPSML
AGLRATYDQD IQNAFAELEN TLRPQLNEGA TLRTERCLAS PVDGILEFAK EWDADLIVMG
SSGLSGTARL LLGSTADKIT RHAPCPVLVT RMQAPEQRPP QPFRQILVGI DHSPFSGPLA
RLATSVVAPA GVIELVHIWS PPFVSVLGTH LGGIETTEWT TAREAVIGDE AKRLEDFAQS
LDLSGINCFI GAGNVPDALL DRADEHKADL IVVGAHGRRE LGEKLIGTVT DRLLRHAHLS
VLVLPEGGLP RWTL
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