| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3112 |
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| Symbol | |
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| ID | 8545500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 4286128 |
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| End bp | 4287159 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646387779 |
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| Product | Histone deacetylase |
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| Protein accession | YP_003267507 |
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| Protein GI | 262196298 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.919523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.582775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCACGA TCTACAGCGA AGACCATCAC CAGCAGGAGG GACGCGCCGA GCTCAGCGGC
GGCAAGCTGG TGCCGTGTTA CGAATCACCA GCGCGCGCCG ACGCCATCGC CGATCGCGTG
CGCTCTCTCG GCCTGGGCCC GTTCGAGCCG CCCCAGGACT TCGACGCCGC GGCCATCGAG
CGGGTGCACG ACGCCGAATT CGTCGCGTTT CTGCGCTCCG CCTGGAGCGC GTGGACGGCC
GAGAACGGCG ACGTCGACGC GCTGCCGCTC ACCTGGATGG CGCCCGGCAT GCGCCGCGTG
CTGCCGCAGA CCATCACCGG CAAGCTGAGC TATTATGGCT TCGACGCTGG CACGCCGATC
ACGGCCGGGA CCTGGGCCGC GGCCCGCGGC GCCGCCGAGG TCGCCCTGAG CGCGGCCGCC
CGGGTCCACG CCGGCGCCGG CCACGCCTTT GCGCTGTGCC GGCCGCCCGG GCACCACGCC
GGCAGCGACT TCTACGGCGG CTACTGCTTT CTCAACAACG CCGCCATCGC CGCCCAGTGG
CTGCGCGACC AGGGCGCCGA GCGTGTGGCC GTGCTCGACG TCGACTACCA CCACGGCAAC
GGCACCCAGG AGATTTTCTA CCGGCGTGAC GATGTGCTGT TCGTGTCGCT GCACGCCGAC
CCGCGCAGCG CCTATCCCTT CTTTGCCGGA CACGCGGACG AGACCGGCGC GGACGCGGGC
GCCGGCTGCA ATCTCAACCT GCCGCTGCCC CTGGGCTGCG ACTGGTCGCT CTACGCCGAC
GCGCTCGACA CCGCGCTGGC GCGCGTGCGC GCGTTTTCGC CCGATGTGCT GGTGGTGTCG
TTCGGCGCCG ACACCTACGA GCGCGACCCG ATCTCGCAGT TTCGGCTCAC CAGCGGTGAT
TTCGTCCGCA TGGGCGATCG CATCGGCGCG CTGGCGCGGC CCACGGTGGT GGTCATGGAG
GGCGGCTACG CGGTCTACGC GCTCGGCGTC AACACCGGCA ACTTCCTCAC CGGCCTGGCC
CGCGCTAGCT GA
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| Protein sequence | MLTIYSEDHH QQEGRAELSG GKLVPCYESP ARADAIADRV RSLGLGPFEP PQDFDAAAIE
RVHDAEFVAF LRSAWSAWTA ENGDVDALPL TWMAPGMRRV LPQTITGKLS YYGFDAGTPI
TAGTWAAARG AAEVALSAAA RVHAGAGHAF ALCRPPGHHA GSDFYGGYCF LNNAAIAAQW
LRDQGAERVA VLDVDYHHGN GTQEIFYRRD DVLFVSLHAD PRSAYPFFAG HADETGADAG
AGCNLNLPLP LGCDWSLYAD ALDTALARVR AFSPDVLVVS FGADTYERDP ISQFRLTSGD
FVRMGDRIGA LARPTVVVME GGYAVYALGV NTGNFLTGLA RAS
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