| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3073 |
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| Symbol | |
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| ID | 8545461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 4240515 |
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| End bp | 4242059 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646387744 |
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| Product | Pyridoxal-dependent decarboxylase |
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| Protein accession | YP_003267472 |
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| Protein GI | 262196263 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.441347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.218881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCA AGAAGCTTAT CGACGGCCCC CTCGGGCGCG TCCATCCCCG CGTCGCCAGC
TTCGTCTACG ATCGGCTCAA GCGCATCCCG CTGGTGCGCC GGGTGGTCGA AAACGCATTC
GCCGGCATGC TCGCGAGCAT GGAGGAGGAG CTCAAGCCGT ACAAAGGCGA GTTCGAGACC
TTCGTCCGGC TGCCCGAGCA AGGCCGGAGA CGCGCCGAAA TCCTCGGCGA GATGCGCAGC
TTCGCCGAGC GCGAGAGCGG GCAGTGGCGG GACGGATACG TCTCCGGCGC CGTGTATCAC
GGCGACCAGG AACATATTGA ATTTCTCAAT CAGGTCTACG CCATCAACTC GCAGGTCAAT
CCGCTGCACG TCGACATCTG GCCCAGCGCG ACCAAGTTCG AGGCCGAGAT CGTGGCCATG
ACGGCGAGCA TGCTCGGCGC CGACGCCACC GCGCCCGCGC CCGAGGCCAA CGCGCGCTTC
CCCGGCGCGG TCTGCGGCAC CGTGAGCTCG GGCGGCACCG AGTCGATCCT GCTGGCGATG
AAGACCTATC GCGACTGGGG ACGCGCCGAG AAGGGCATCC GCCGGCCCAA CATGGTGGTG
CCCGAGACCG CCCACGCGGC CTTTGACAAA GCCTCGCAAT ACTTCGGCAT CGAGGCCCGG
CGGGTGCCGC TCACGGGCGA GTATCGCGCC GACGCGAGCG CGGCCGAGCA GCTCATCGAC
AAGAACACCG TGGTCGTCGT CGGCTCGGCG CCCGCGTTTC CGCACGGCAT CATCGACCCC
ATCGAGGAGC TGTCGGAGCT GGCGCGCGCG CGCGGCATCG GCTGCCACGT CGACGCGTGC
CTGGGCGGCT TTTTGCTGCC GTGGGCGCGC GAGCTCGGCC ACCCGGTGCC GGACTTCGAT
TTCCGCCTGC CGGGCGTGAC ATCGATGTCG GCCGACACGC ACAAATACGG CTACGCGGCC
AAAGGCACCT CGGTGGTCAT GTACCGCGGC GAGGCGCTGC GCCATCATCA GTTCTTCACC
ATCAGCGACT GGCCCGGCGG ATTGTATTTC TCGCCGACCC TGGCCGGCAG CCGTCCGGGC
GCGCTCAGCG CCGCCTGCTG GGCGTCGATG GTGAGCATCG GCGCGGCCGG CTACCGCGAC
GCAGCCGCGC GCATCCTGGA CGCGGCCGAG CGCATCAAGA CCGGCCTGCG CGCATTGCCA
GCGATCGAGA TCCTGGGCGA TCCGCTGTGG GTCATCGCCT TTGCCGCGCG CGATGAGCGC
GTGGACATCT ACCGGGTCAT GGCGCGCATG AGCCAGCGCG GCTGGTCGCT CAACGGCCTG
CATCGGCCCG CGTGCGTGCA TCTGTGCGTC ACCCTGCGGC ACGCCGAGCC GGGCGTGGCC
GAGCGCTTCG TCGCCGACCT GGGCGAGGCC ATCGCCGAGG TTGAAGCCGC CCCGGGCGAG
GCCGAGGGCG CCGCGCCCGT GTACGGCATG GCCGCCACCA TCCCCGTGCG CGGCATGGTC
GGCGAGATGC TGCGCCGCTA CATGGACCTG CTGTATCGGC CGTAG
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| Protein sequence | MDIKKLIDGP LGRVHPRVAS FVYDRLKRIP LVRRVVENAF AGMLASMEEE LKPYKGEFET
FVRLPEQGRR RAEILGEMRS FAERESGQWR DGYVSGAVYH GDQEHIEFLN QVYAINSQVN
PLHVDIWPSA TKFEAEIVAM TASMLGADAT APAPEANARF PGAVCGTVSS GGTESILLAM
KTYRDWGRAE KGIRRPNMVV PETAHAAFDK ASQYFGIEAR RVPLTGEYRA DASAAEQLID
KNTVVVVGSA PAFPHGIIDP IEELSELARA RGIGCHVDAC LGGFLLPWAR ELGHPVPDFD
FRLPGVTSMS ADTHKYGYAA KGTSVVMYRG EALRHHQFFT ISDWPGGLYF SPTLAGSRPG
ALSAACWASM VSIGAAGYRD AAARILDAAE RIKTGLRALP AIEILGDPLW VIAFAARDER
VDIYRVMARM SQRGWSLNGL HRPACVHLCV TLRHAEPGVA ERFVADLGEA IAEVEAAPGE
AEGAAPVYGM AATIPVRGMV GEMLRRYMDL LYRP
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