Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_2737 |
Symbol | |
ID | 8545124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 3762208 |
End bp | 3763005 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 646387430 |
Product | glycerophosphoryl diester phosphodiesterase |
Protein accession | YP_003267159 |
Protein GI | 262195950 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.399344 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00114829 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGAGCGCGG CGGCGCCGCC CTGGACCCTG GGCCGCGCCG CCCTGGGCCG GCCGCTGATC TTCGGCCACC GCGGCGCCGA GCACCAGGTG CCCGGCAGCG GTCTGGTCGA GAACACCCTC GAGAGCTTTG CCCGCGCCCA CGCGCGCGGC GCCGACGGCG TCGAGCTCGA CGTGCACCAG TGCGCGAGCG GCGAGCTGGT GGTGTTCCAC GACGACGACT TGCAGCGCCT GGCCGGCCGC CCCGAGCGCG TCACCGCGAC CGCGTGGACC GTGCTGCGCA AGGTGCGCCT GAGCCAGCCC GGAGGCGCGG CCGGCGACGC GCGCATCTCG ACCCTGGGCG AAGTGCTGGC AGCGCTGCCG GCGAGCTCGG TCATCAACGT CGAGCTCAAG CCGACGCGGC GCCATCGCGT GCCCGCGCTG GTGCGCGAGG CCGTGGCCAC GATCGCCGAC AGCCCGGCCA GCGAGCGCGT GATCGTGTCG TCGTTCGATC CCGTGATCCT GGCCGCGCTG CGCGTGCGCG CGCCGCAGAT GCCGAGCGGC TACCTGTTTC ACGACGAGCA GCAGGCGGCC GCGCGCCGCG GCTGGGTCGG CTACGCGCTG CGCACCATGG CCCTGCACCC GCAGGCCAGC CTGGTGGACG CCGAGCGCAT GCGCCGCTGG CGGCGGCGGG GGCTGCTGGT CAACACCTGG ACCGCCGATG AGCCGGGCGA GATCGCGCGC CTCGTGCGGC TCGGCGTGGA CGGCATCATT TCGAATGCTC CCGCGACCGT GCGCGCCGTG CTGGACCGCG CCGCGTAG
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Protein sequence | MSAAAPPWTL GRAALGRPLI FGHRGAEHQV PGSGLVENTL ESFARAHARG ADGVELDVHQ CASGELVVFH DDDLQRLAGR PERVTATAWT VLRKVRLSQP GGAAGDARIS TLGEVLAALP ASSVINVELK PTRRHRVPAL VREAVATIAD SPASERVIVS SFDPVILAAL RVRAPQMPSG YLFHDEQQAA ARRGWVGYAL RTMALHPQAS LVDAERMRRW RRRGLLVNTW TADEPGEIAR LVRLGVDGII SNAPATVRAV LDRAA
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