Gene Hoch_2725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2725 
Symbol 
ID8545112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3751779 
End bp3752651 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content69% 
IMG OID646387418 
Productribonuclease Z family protein 
Protein accessionYP_003267147 
Protein GI262195938 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.399344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.100634 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATGGA TGGACCAGGA GATGCTCACC AAGGTTCAGG CAGGCGGTTA CTCGATCCGC 
GGGGTCTCGG TCGGCGGGGT GTACACCTCG ATGATGGTGT CCGAGCTGGG CGCGATGTTC
GACGTCGGCA TGGCGCTGCG CTCGTTCTCG GGCGCCGATC GCCTGTTTCT CAGCCACGCG
CATATGGACC ATCTGGGCGG GCTGCTGGCG TTTCTCGGCA TGCGCGGCGC CTACGGGGTC
GAGCGCCCGC TGGAGGTGTT TCTGCCCGCC GCCATCGCCG AGCCGGTGCA GGCGCTGTTG
CGCGCGGCCG AGCCGCTGCA GCGCTTTCCC CTCAAGATCG CGACCGTGCC GATGGAACCC
GGACAGGTGG TCGAACTGCG CCGCGATCTC AGCGTGCGCG CGCTGCGCAC CTTCCATCCC
GTGCCCTCGC TGGGCTATCA GTTCTTTCGC AGGGTGAGCA AGCTGCGCGA CGAGTTTCGC
GACCTGCCCG GCGCCGAGAT CGGCCGCCGC CGGCGCGCGG GCGAGGATCT GTTCCGCGAG
GAGACCCACC TCGAGCTGGC CTACGTCACC GACACCCTGG TGCGCGTGCT CGACACCGAG
CCCTCGCTGC TGCGCAGCAA AGTGCTGATC CTCGAGTGCA CCTTCCTCGA CCAGCGCAAG
AGCCTGGCCG ACTCGCGCGC GGGCTGTCAC ATCCACCTCG ACGAGCTGCT CGAGCGCGCC
GACTCGTTCG AGAATGAGGC GCTGGTGCTC ATGCACTTCA GCCAGCTCTA CAAGCCGCGC
GAGGTGCCGC GCATCCTGCG CGAGCGCTGC CCCGAGTCGC TGGCGCGGCG CATCGTCAGC
TTTGCGCCCG ACCGCAACGC GTGGCCTGGC TGA
 
Protein sequence
MLWMDQEMLT KVQAGGYSIR GVSVGGVYTS MMVSELGAMF DVGMALRSFS GADRLFLSHA 
HMDHLGGLLA FLGMRGAYGV ERPLEVFLPA AIAEPVQALL RAAEPLQRFP LKIATVPMEP
GQVVELRRDL SVRALRTFHP VPSLGYQFFR RVSKLRDEFR DLPGAEIGRR RRAGEDLFRE
ETHLELAYVT DTLVRVLDTE PSLLRSKVLI LECTFLDQRK SLADSRAGCH IHLDELLERA
DSFENEALVL MHFSQLYKPR EVPRILRERC PESLARRIVS FAPDRNAWPG