Gene Hoch_2692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2692 
Symbol 
ID8545079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3711491 
End bp3712669 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content72% 
IMG OID646387386 
Productgalactokinase 
Protein accessionYP_003267115 
Protein GI262195906 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0153] Galactokinase 
TIGRFAM ID[TIGR00131] galactokinase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.44477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.174085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACCCT CTACTACGCC ACTCGCACGC GTGGTCGCCG CATTTCGCAA GCAGTTCAGC 
GGTGGACCTC GCGTCGTGGT GCGCGCCCCG GGCCGCGTCA ACCTCATCGG CGAGCACACC
GACTACAACG ACGGTTTCGT GCTGCCGATG GCCATTGACC GCGCCGTGTG GATCGCGCTC
ACGCCCGAGC TGCAGCCGCG GCTCATCGTC AAATCGCTCG ACAAGAAGAA CGTCGCCCGC
TGCTCGCTCA AGCAGATGAC GCCGGGTACG AGCGACTGGT TCGAGTACAT CAAGGGCGTG
GCCTGGGTGC TGGGTCGCGA GGGCCGCTCG ACCCCGGGCT GGCAGGGCCT GGTGGTCAGC
GAGGTGCCCA TGGGCGTGGG CCTGGCGTCG TCGTCGGCGC TGGCCCTGGC CGCCATGCGC
GCCTTTGTCA GCCTGGCCGC CGGCGACTGG AACGCGCACC AGATGGCGGC GCTGGTGCAG
CGCGCCGAGC GCGAGTGGGT GGGCGTGAGC TGCGGCATCC TCGATCCTCT GGCCTCGGCC
GCGGGGCGAC GCGGCCACGT CATGCTGGTC GATTGTCGCT CGCACGAGCT CGAGTATCTG
CCCATGCCCG AGGAGCTGGC CGTGGTCGTG CTCGACACGC AGAGCCGCCG CGGCCTGCTC
GACGGCAGCC CGCACGAGCG TCGAGCCCAG TGTCAGAACG CGGCCCGCAC CCTGGGCGTG
CCGGCGCTGC GCGACGCCAC CATCAGCGAT CTCGAGCGCC GCGGCGGCAT GCTCGACGAC
ACCACGCTGC GGCGCGCGCG CCACGTCATC ACCGAGAACG CGCGCACCAA GGAGGCCGCC
GAGGCCCTGC GCAGCGGCGC TTACGAGCGT CTGGGTGAGC TGCTCGACAG CAGCCACGAG
AGCCTGCGCA ACGACTTCGA GGTGTCGAAC GCGGCCCTCG ACGCCATGGT GCGCCACGCC
CGCCGTCACG CCGCCTGCTA CGGCGCGCGG CTCACGGGCG CCGGCTTTGG CGGCTGCGTG
GTCGCCCTGG TGCGCCGCGA GGCGCTGGCC GCGTTCATCG ACGCCACCTG CTCGGCCTAC
CTGGCCGAGA CCGGGCGGCG GCCGCACGCC TATCCCTGTG CTCCCGCCGA CGGCGCCGGC
GTGGCCCCGC TGAGCGCGCT GCCCTGGGAT CGCGGGTGA
 
Protein sequence
MSPSTTPLAR VVAAFRKQFS GGPRVVVRAP GRVNLIGEHT DYNDGFVLPM AIDRAVWIAL 
TPELQPRLIV KSLDKKNVAR CSLKQMTPGT SDWFEYIKGV AWVLGREGRS TPGWQGLVVS
EVPMGVGLAS SSALALAAMR AFVSLAAGDW NAHQMAALVQ RAEREWVGVS CGILDPLASA
AGRRGHVMLV DCRSHELEYL PMPEELAVVV LDTQSRRGLL DGSPHERRAQ CQNAARTLGV
PALRDATISD LERRGGMLDD TTLRRARHVI TENARTKEAA EALRSGAYER LGELLDSSHE
SLRNDFEVSN AALDAMVRHA RRHAACYGAR LTGAGFGGCV VALVRREALA AFIDATCSAY
LAETGRRPHA YPCAPADGAG VAPLSALPWD RG