| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2495 |
|---|
| Symbol | |
|---|
| ID | 8544882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 3433239 |
|---|
| End bp | 3435194 |
|---|
| Gene Length | 1956 bp |
|---|
| Protein Length | 651 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 646387195 |
|---|
| Product | Cl- channel voltage-gated family protein |
|---|
| Protein accession | YP_003266924 |
|---|
| Protein GI | 262195715 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0038] Chloride channel protein EriC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.636545 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.575116 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATTCCC GGCACCTACC AGAAAAGCTC GCCGAGCTGC CGGACAAACT GGCGCGCCTG
CTGCCGCGCG GCGGCATCGC CGCGCTGACC GACAGCATCG AGTTCATGTC GCTGTTTCGC
TGGGCGCGCC TGAGCGTGGT CGTCGGCGCG GTCGTCGGCC TGGCCGCGGC GGGCGTGTTC
TGGGTGCTCG AGTGGGGCGA GTCGCTGCTG ATGGAGAAGC TGGCGCTGTT TCCCACGCTC
GACACCCGCG GCCTGGGCAA GCGCATTTTG TCCTCGGGCG GCGTCCTGCA GTGGGCGCTC
ATCATCCTCA CGCCCGCGCT CGGCGGCCTC GCCGCCGGGC TGGTGAGCTG GCGCTTCGCA
CCCGAGACCG AGGGCGCCGG CGTCGACAAC GTGCTCGACG CCTACCACAA CCGCGGCGGC
CGCATGCGCA AGCGCACGCC GACGGTCAAG CTGATCACCA CGCTGTTCAC GCTGGGCAGC
GGCGGCTCGG CCGGACGCGA GGGGCCCATG GCCCAGATCG GCGCCGGCGT CGGCGCCTAC
GTGGCCGACC GCTTCGGTCT CAGCAAGCGC GAGCGCCGGC TGCTCTTGCT CGCGGGCGCG
GCCGGCGGCG TCTCGGCGCT GTTCCGCGCG CCGCTGGGGG CAGCGCTGTG GTCGCTCGAG
GTGCTGTACC GCAAGGACTT CGAATCCGAG GGTCTGTTTC CCTGCCTGGT GTCCTCGGTG
ACCGCGTACT CGGTGTTCAC CACCATCTAC GAGCCCGGCT CGCTGTTCTT CGTGTCGGTG
CGCTACCACT TCCAACCCAC GCAGCTCCTG TTCTACGGCC TCATGGCCCT GGTGTGCGCG
CCCTTCGGCC TGCTGTGGAT CACGCTGCTG CGCCAGGCGC GCACCCGGCT GTGGGAGCCC
ATGCGGGTCC CCGTATGGCT CAAACCCGCG CTCGGCGGCC TCGCGCTCGG CATCTTCTGC
GTGTTCGTGC CGTGGGTGTT CTCGACCGGC TACGGCTGGA TGCAGGACGC GCTGCGGCCC
ATCGGCGACA CCTCGCGCAA CCTGCCCGTG GGCTACCAGG GCTTCGCCAT GCTGCTCGGC
CTGGCCGTGG CCAAGATGAT CGCCACCTCG CTCACGGTCA GCTCGGGCGG CTCGGGTGGC
GTATTCGCGC CCACCCTGTT CATCGGCGGC TTCATCGGCG GCGCCTTCGG CCAGCTCTTC
CACGTCCTCG CGCCCGGCAT CGTCAGCCAG CCGAGCGCGT TCGTACTGGT CGGTATGGGC
GCGTTCTACG CCGGCGTGGC GCGCACGCCC ATCGCCACCA TCATCCTCAT CTCCGAGATG
TTCGGCTCCT ACGATCTGCT GGTGCCGCTG ATGTTCTGCG AGATGATCAC CATGCGCCTG
CTCGGCCGCC ACACCCTGTA CGGCCAGCAG GTCACCGACG CCCGCCACTC GCCCGCCCAC
GCGGACGAAT TCACGGTCGA CGTACTCAAA GACCTCAAGG TCTCCGAGCA CTACGCCAAG
GGCCGCGCCG CCGCGACCAT CCCCGACAAC ATGAACCTGC GCGACTTCCT CGAGCACGTG
GCCCGCGCCG CCGACTCGCT GTCCGTGGTG CACGACGCCA AGGGCGCGCT GGTCGGCATC
GTGTCGCTGA GCAACGTGCG CGCGGTGGTG TCCGAGACCG AGTTCCTCTC GTTCATGCTG
GTCACCGACG CCATGTGGCC GCTGCGCACC CTGGCCCCCG ACGACGACCT GCGCACCGCG
CTCGAGGTGT TTCTCGACTC CAAGTACGAC CACCTGCCCG TGGTCGATCC CGCGGAGCCG
CGCCGGGTCC TGGGTATGCT CTCGCAACAG CAGATCTTCG CCGCCTACAA CGCCGAGTTG
CTGCGTCGAC GCCTGCAGCG CGAGGGCGAC AGCATGCCCA TGCGCGCGCC CAGCAAGAGC
GATATTCAGC GCGCGTCCAC GCGCTCTGAC GAGTGA
|
|---|
| Protein sequence | MDSRHLPEKL AELPDKLARL LPRGGIAALT DSIEFMSLFR WARLSVVVGA VVGLAAAGVF
WVLEWGESLL MEKLALFPTL DTRGLGKRIL SSGGVLQWAL IILTPALGGL AAGLVSWRFA
PETEGAGVDN VLDAYHNRGG RMRKRTPTVK LITTLFTLGS GGSAGREGPM AQIGAGVGAY
VADRFGLSKR ERRLLLLAGA AGGVSALFRA PLGAALWSLE VLYRKDFESE GLFPCLVSSV
TAYSVFTTIY EPGSLFFVSV RYHFQPTQLL FYGLMALVCA PFGLLWITLL RQARTRLWEP
MRVPVWLKPA LGGLALGIFC VFVPWVFSTG YGWMQDALRP IGDTSRNLPV GYQGFAMLLG
LAVAKMIATS LTVSSGGSGG VFAPTLFIGG FIGGAFGQLF HVLAPGIVSQ PSAFVLVGMG
AFYAGVARTP IATIILISEM FGSYDLLVPL MFCEMITMRL LGRHTLYGQQ VTDARHSPAH
ADEFTVDVLK DLKVSEHYAK GRAAATIPDN MNLRDFLEHV ARAADSLSVV HDAKGALVGI
VSLSNVRAVV SETEFLSFML VTDAMWPLRT LAPDDDLRTA LEVFLDSKYD HLPVVDPAEP
RRVLGMLSQQ QIFAAYNAEL LRRRLQREGD SMPMRAPSKS DIQRASTRSD E
|
|---|
| |