Gene Hoch_2431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2431 
Symbol 
ID8544817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3358182 
End bp3359129 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content70% 
IMG OID646387130 
Product3-methyl-2-oxobutanoatehydroxymethyltransferase 
Protein accessionYP_003266861 
Protein GI262195652 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0413] Ketopantoate hydroxymethyltransferase 
TIGRFAM ID[TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.468914 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCA AGAAGGTCAC CATCCACACC TTGCAGCAGA AGAAAGCGAG CGGCGACAAG 
ATCGTCATGC TCACGGCCTA CGACGCGACC TTCGCCCGTC TGCTCGACGA GAGCGAGATC
GACATCCTGC TCGTCGGCGA CTCGCTGGGC ATGGTCGTCC AGGGACACGA GACCACCTTA
CCGGTCACCC TGGACGAAAT CATCTACCAC ACCCGCGCCG TGGCCCGCGG CGCCCGCCGC
GCGCAGATCG TCGGCGACAT GCCCTTCATG TCGTATCAGG CCGGTATCGA CAGCGCGGTC
GAGAACGCCG GACGCCTGGT CAAAGAAGGC GGCTGCCACG CGGTCAAGCT CGAGGGCGGC
GCGCAGCACA CCGAGCTCGT CCGGCGCCTG GTGAGCTGCG GCATCCCGGT GATGGGCCAC
ATCGGCCTCA CGCCGCAGTC GTTTCACCAG ATGGGCGGCT TCAAGGTCCA GGGCCGCGGC
CAGGGAGCGG CCGAGCGCCT GCTCGCCGAC GCCCGCGCGC TGCAGGACGC CGGCGCCTAC
AGCCTGGTGC TCGAGGGCAT CCCGTCCGAA ATCGCGGCGC GCATCACCGA CGTGCTCGAC
ATCCCCACCA TCGGCATCGG CGCCGGCCCG CAGTGCGACG GCCAGGTGCT GGTGATCTAC
GACCTGCTGG GCATGATCGA CACCTTCAAG CCCAAGTTCG TGCGCCGCTA CGACGACCTG
GCCGAGCGCA TCCGCTCGGC CACCCGAGCC TACGCCGACG ACGTCCGCAG CGGCAGCTTC
CCGGCCGAGC GCGAGAGCTT CGCCATGACG GCGCGCACCG CCGCCAAGAA ACCGGCCGCG
ACCGCCGAGG CCGCGCCGGC CAAGCAAGCG CCGACCAAGC AGTCGCCCGA CGCCGACTCC
AGCGCCGAAC TCGGCGGCCT CTACGCCTCG GTATCGGCCG CGCCCTGA
 
Protein sequence
MTTKKVTIHT LQQKKASGDK IVMLTAYDAT FARLLDESEI DILLVGDSLG MVVQGHETTL 
PVTLDEIIYH TRAVARGARR AQIVGDMPFM SYQAGIDSAV ENAGRLVKEG GCHAVKLEGG
AQHTELVRRL VSCGIPVMGH IGLTPQSFHQ MGGFKVQGRG QGAAERLLAD ARALQDAGAY
SLVLEGIPSE IAARITDVLD IPTIGIGAGP QCDGQVLVIY DLLGMIDTFK PKFVRRYDDL
AERIRSATRA YADDVRSGSF PAERESFAMT ARTAAKKPAA TAEAAPAKQA PTKQSPDADS
SAELGGLYAS VSAAP