| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2371 |
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| Symbol | |
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| ID | 8544757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 3288333 |
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| End bp | 3289217 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 646387071 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003266802 |
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| Protein GI | 262195593 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.171648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.191081 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGATA ATCCCCTCGA AACCACCGTC GTCACCCCCG TGAGTCGCAT CTCGGAGCGA
CCCTCGACCA GCGACGCGTG CTTGGTGGTC ATCTACGGCC ACGACCTCGG CCGCAAGTAC
AACCTCGATC GCGAGTCGAT GATTATCGGA CGCGCGTCCA GCGCCGATAT CCGACTCGAG
CAGGAGGCGG TATCGCGCAA CCACTGCCGC CTGTTCAACA CCGGCGACAG CGTGCTGGTG
CGCGACCTGG GCTCGACCAA CGGCACCTAC ATCAACGACC GCGTGGTCGA GGAGCACGGG
CTCCAAGACG GCGATCTGCT CAAGATCGGC CGCTGTATCT TCAAGTTCTT ATCGGGCCAG
AATATCGAGA GTGCGTATCA CGAAGAGATT TATCGGCTCA CGACCGTCGA CGGTCTCACC
CAGATCTATA ACAAGCGCTA CTTCATGGAG TCGCTGGAGC GCGAGATGGG TCGCGCGCAG
CGCTACCGCC GCGACCTGTC GCTGATTCTC TTCGACATCG ACCACTTCAA GTCGGTCAAC
GACACCTACG GCCACCTGGC CGGCGACTAC GTGCTCAAGC AGCTCGCGGT GGAGATCAAG
CGCCGCATTC GCCGCGAGGA CATCCTGGCG CGCTACGGCG GCGAGGAGTT CGCGATCATT
CTGCCCGAGC TCGACGTCGA CAGCGCCAAG CAGTTCGGCG AGAAGATCCG GCGCATCGCC
GAGGATGCGC GCTTTTTCTT CGACAACACC GACATCCCGG TGACGATTTC GGTCGGCGTG
ACGGTGCTGT CGCCGACCGT GCACAGCGCC GCCGAGTTCA TCAAGCTCGC CGACGAGAAG
CTCTACGAGG CCAAGGCTGA GGGCCGCAAC TGCGTCGTCG GCTGA
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| Protein sequence | MSDNPLETTV VTPVSRISER PSTSDACLVV IYGHDLGRKY NLDRESMIIG RASSADIRLE
QEAVSRNHCR LFNTGDSVLV RDLGSTNGTY INDRVVEEHG LQDGDLLKIG RCIFKFLSGQ
NIESAYHEEI YRLTTVDGLT QIYNKRYFME SLEREMGRAQ RYRRDLSLIL FDIDHFKSVN
DTYGHLAGDY VLKQLAVEIK RRIRREDILA RYGGEEFAII LPELDVDSAK QFGEKIRRIA
EDARFFFDNT DIPVTISVGV TVLSPTVHSA AEFIKLADEK LYEAKAEGRN CVVG
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