Gene Hoch_2362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2362 
Symbol 
ID8544748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3273636 
End bp3277943 
Gene Length4308 bp 
Protein Length1435 aa 
Translation table11 
GC content72% 
IMG OID646387062 
Productserine/threonine protein kinase 
Protein accessionYP_003266793 
Protein GI262195584 
COG category[T] Signal transduction mechanisms
[R] General function prediction only
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0458945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCACC GAGAGGACAG GCGTGAACCC GAGCCAACGC GACGCGCCAC CAGCTCCGAT 
CGGGACGAGC CGAGAGGCGG CGCCAGGCCG CCGCAGGGCG AGCGGCCGCT AGCCCGCATT
CAGTCCGACG ACACCAACAC CGCCGACGTC CACTTCTCGC GCGCCGCGCG CCATCGCCAG
TCCGACGAGA AGGAGCGCTT GCGCGCGATG GGCCAGGCGC TCGAGCGCGA GCGCGTGGCC
CAGGGCTCGC GCCCCGACAT CGAGACCCGC TTCCCGCCGG GCACCCTGCT GGCCGAGCGC
TACCGCATCA TGCGCCTGGC CGGTCGCGGC GGCATGGGCG AGGTGTACAG CGCCGAGGAT
CTGGAAATCG GACAATTGGT CGCCATCAAG ATCCTGCCGG CGGCCTGGGA GCAACATCCG
GGACGCCTCG AGCGGCTGCG CAACGAGGTC CGCATGGCGC GCAGCGTGGC TCATCCCAAC
GTGTGCCGCG TCTACGACAT CGGCGAGGCC GACGGGCTGC GCTTCGTGAC CATGGAGTAC
GTCGGCGGCG AGGACCTCGG CGCGCTGCTG CGCCGCGTGC GCCGTCTGCC GCCGCAGCGC
GCCGCGCAGC TCGGCGTGCA GATCTGCGAA GGTCTGGCCG CGATCCACAG CGCCGGCATC
CTGCACTGCG ACCTCAAGCC GGCCAACTTG ATGCTCGACA GTCACGGCGA TATCCGCATC
GCCGACTTCG GCCTCGCCAG CCTGGCGACC AAGCGCCCCG AGCAGGGCAA GCTGCAGGGC
ACGCCCGCGT ACATGGCGCC GGAGCAGTTC AGCCGCCAGG AGATTTCGAT TCAGAGCGAC
CTCTACGCCC TGGGTCTGGT GCTCTACAAG CTGTTCACGG GCAGCCCGGC GTACGTGGCC
GACTCCGTCA CCAAGCTGCA CGCTCAGCGC ACGGCTGGGC CGCCGCCGCC GCCCTCGCTG
CGCGTCGCCG ACGTGCCGCC CAACGTCGAC GCCATCCTGC AGCGCTGTCT CCAGCCCAAG
CCCGCGCTGC GACCGGGCTC GGCCCTCGAG GTCGCGCTGG CGCTGGCGCC CGCGCCCAGC
TCGGCGCTGG TCACGGTCAT GGTCGTGCAC CCGCTCGACG CCACCAGCCT CGCGGCCGAG
CTCGGCGACG ACAGCGCCCT GCGCATCGCG GCCGCGCACG CCGAGATCCT CGACCTGGTG
TGCGCGCGCC ACCACGGCCG CCGCGCCGAC GACGGCCGCA CCCTGGCCAT CCTCTTCGAC
AACCCGCGCG ACGCGGTGCA CGCCGCCCTC ACCCACCAGC GCAAGCTGCA CCTGCTCGTC
GAGCGCGAGG GCATGCGCGC GCTCGAGCAG GCCGGCCACC ACCTCGGCGC CGGCGTCGGC
ATCCACTTCA GCGCCGCCGC GCCGATACCG GGCGCCAGCG AGAGCGTCGC GAGCTCGGCC
CGCAGCACCG CGCAGCAGCT CGCCCTGGTC GCTGCCGCCG GTCAGATCCT GCTCACGCGC
GGGGTCTTCG ACCTGGTGCG GCAGTTCGAG CTGGCCAAGC GCGAGGAGGA TCAGGGCAGC
ACGGCCACGG TCGACCCCGG CCACCTGCGC TGGCTGGCGC ACGGCGACTA CGAGCTGTCC
GAGGCCGACG AACCGGTGGC CGTGTGCGAA GTCGGACACC CGGACCAGGC CAAGCTGGCG
CCGCCGCCCG ACAGCGAGCG CGCGCGCCGC CTGATGATTC AAGACGTGGT CGTGGGCTGG
CGGCCGGCGC CCGGCCTGCG CCTCGAGGCC CGCCCGTCCT GGCGTATGGA GCGCAAGCTC
GGCGAGGGCG GTTTCGGCGA GGTCTGGCTG GCCCGCCACG ACAGCACCGA CGAGAGCCGG
GTGTTCAAGT TCTGCTACGA CGCCGAGCGG CTGCGCGGTC TCCAGCGCGA GATCGCCCTG
TTTCGCCTGC TCGGCGAGGC CCTGGGCGAG CGCGAGGACA TCGTCCGCAT CCTCGACTGG
AACCTCGAGG AGGCGCCGTA TTTCATCGAG TCCGCGTACA CGGCCGGCGG CAACCTCAGC
GCCTGGGCCG AGGAGCAGGG CGGCGCCGCC CAGCTCCCGC TCGCGCAGCG GCTCGAGATC
ATCGCCCAGG TGGCCACCGC GCTGGCGGCC GCGCACTCGG TCGGCGTGCT GCACAAAGAC
GTCAAGCCGA GCAACGTGCT CATGGCCACC GACGCGGGCG GCCCGCCCCA GGCCCAGCTC
GGCGACTTCG GCATCGGCGG CGTCACCGAC CCCGGCCGGC TGAGCACCGC GGCCATCACC
GCGCTCGAGT GGAGCGAGGC CGCGCACAGC AACACCGACG GCCTCGCCGG CAGCCGCATG
TACATGGCGC CCGAGCTGCT CGAGCACAAG CCCGCGAGCA CCCTGGCCGA CGTCTACGCC
CTGGGCGTCA TGCTCTACCA GATCGTCGTC GGCGACTTCT CGCGCGCGCT GGCGCCCGGC
TGGGAGCGCG ACATCGACGA TCCTCTGCTG CGCGGCGACA TCGCCGCGGC CGTGGACGGC
GACCCCGCGC GCCGCCTGTC GCACGCCGCC CTGCTGGCGA CGCGGCTGCG CACCCTGCCC
GAGCGCCGCA GCGAGGCCGA AGAGCGCCAG CGCGAGCTGG TGCAGCATCG CCACGCCGCT
GTGGTCGCCG CGCGCGCGCG CAGGCGTCGC CGCATCTTCG CCGTGGCCGC CGTGGTGCTG
CTGATCTTCG CGGTCACGGT CACCGTACAG TCGCTGCGCA TCGCCGAGAA AGCGCGCGCG
GCCGCCGACG CCGCCCAGAC CGCACAAAAA GTGTCGGGCT TTTTGGTCTC GCTGTTCGAC
GACGTCGATC CCTACAAAAA CGAGAACCCC GACATCTCGG CGCACGAGAT CCTCGACCGC
AGCCGCGACA AGATCGACGC GCTCGGCGAC GAGCCGGAAG TACAGGCCTC GCTGATGCAC
GTCATCGGCG TGGTGTACCG CAACATCGGC GTCTACCGCG AGGCCAGCGC GCTGCTCGAG
CAGGCCGTGG CCAAGCGCCG CGCGCTGCAC GGAGACGAGC ACGCCGAGGT GGCCGAGAGC
CTGCACGCCC TGGCCATCTC GCTCGAGCGC CAGGGCCTGT TCATCGCCGC CGAGGAGCAC
GCGCGCGAGG CCGTGCGCAT CCGCCGCGCG CTGCACGGCG AGAACCACCT GGGCACCGCC
GAGACCAAGG AGACCCTGGC CGATGTGCTG GTCGCCCTCG ACCGCTTCGA GGAAGCCGAC
CGACTGTACC AAAACATCCT CGAGACCCGG CGCAGCCACT ACGGCGCCGA GCACCCCAGC
ATCGCCCAGA TCCTGCGCCG CATCGGCACC GTGCAGATCC GGTCTGACGA GTTCGCGGCC
GCGTATAGCT CCTACGGCAA AGCCCTCGAG ATGTTCCGCC GCCTGCCGGG CGACCATACC
CTCGAGATCG CCAAGCTGCT CTACTACATG GGCCAGGCGC TAGCCTCGCG CGACGAGCTG
GCCGAGGCCA CCCGGCTGCA CGAGGAGTCG CTGGCCCTCA TCCGGCCGCG TCTGGGCGAG
GACCATCCGC AGATCGCGCT GGCCATGGAC GAGCTGGCCT TCATCTATCA GCGCACTGGC
CAGTACGAGC GCGCCGGCGA GCTGCTGCGC GAGCTGCGCG ACATGCACCA AGCCTCGCAG
GGCGAGCGCA GCATCGGGGT CGCCAACGTC GAGCGCGAGC TGGCCTTCCT CGCGCTCAAC
CTGGGCCGCT GCGTCGAGGC CAGCGAGCAC GCGCACAACT CGCTGAGCAT CCTCGAAGAG
CTCCTGCCCG AGGGCCACAA CATGATCGCC AGCGCCAAGG GCAACCTCGC CTACCTGCTC
GACGTCGAGG GCCGCCACGA GGAAGCCGAG CGCTACCATC GCGACTCCTA CGAGAGCTAC
ACCCGCGCCC AGGGTTCGGA CAGCCTGTCG ACCTACCTCA CCGCGATCAA CCTCGCCGGC
TCCTACATCG ACGCCGGCGC GCTCGACAAG GCCGCGCCGC TCATCGACGA GCTGAGCCGG
CAGTTTCGCG CCCAGGGCGA GGCCATCAGC GCCGAGCTCG ACTGGCTGCC CGCACACTTC
GACAGCGTCC GCGGCAGCTA CCTGGCCAAG CTCGGCGACA TCGCCCCCGC CGAGTCGCTG
CTGCGCAGCG CCTACGACAG CCTGCGCGAG CTACACGGCG CCCACCGCCT GTACACCAAG
CGCGCGCTGT GGCGCCTGGC CGAGGTCCAC GAGCAGCAGG GCGACGCCGA ACAGGCGCAG
CTCTATCGCG CCGAACTCGG CCCCCCTCCG TGCTCGGCGC AGCTCTGA
 
Protein sequence
MDHREDRREP EPTRRATSSD RDEPRGGARP PQGERPLARI QSDDTNTADV HFSRAARHRQ 
SDEKERLRAM GQALERERVA QGSRPDIETR FPPGTLLAER YRIMRLAGRG GMGEVYSAED
LEIGQLVAIK ILPAAWEQHP GRLERLRNEV RMARSVAHPN VCRVYDIGEA DGLRFVTMEY
VGGEDLGALL RRVRRLPPQR AAQLGVQICE GLAAIHSAGI LHCDLKPANL MLDSHGDIRI
ADFGLASLAT KRPEQGKLQG TPAYMAPEQF SRQEISIQSD LYALGLVLYK LFTGSPAYVA
DSVTKLHAQR TAGPPPPPSL RVADVPPNVD AILQRCLQPK PALRPGSALE VALALAPAPS
SALVTVMVVH PLDATSLAAE LGDDSALRIA AAHAEILDLV CARHHGRRAD DGRTLAILFD
NPRDAVHAAL THQRKLHLLV EREGMRALEQ AGHHLGAGVG IHFSAAAPIP GASESVASSA
RSTAQQLALV AAAGQILLTR GVFDLVRQFE LAKREEDQGS TATVDPGHLR WLAHGDYELS
EADEPVAVCE VGHPDQAKLA PPPDSERARR LMIQDVVVGW RPAPGLRLEA RPSWRMERKL
GEGGFGEVWL ARHDSTDESR VFKFCYDAER LRGLQREIAL FRLLGEALGE REDIVRILDW
NLEEAPYFIE SAYTAGGNLS AWAEEQGGAA QLPLAQRLEI IAQVATALAA AHSVGVLHKD
VKPSNVLMAT DAGGPPQAQL GDFGIGGVTD PGRLSTAAIT ALEWSEAAHS NTDGLAGSRM
YMAPELLEHK PASTLADVYA LGVMLYQIVV GDFSRALAPG WERDIDDPLL RGDIAAAVDG
DPARRLSHAA LLATRLRTLP ERRSEAEERQ RELVQHRHAA VVAARARRRR RIFAVAAVVL
LIFAVTVTVQ SLRIAEKARA AADAAQTAQK VSGFLVSLFD DVDPYKNENP DISAHEILDR
SRDKIDALGD EPEVQASLMH VIGVVYRNIG VYREASALLE QAVAKRRALH GDEHAEVAES
LHALAISLER QGLFIAAEEH AREAVRIRRA LHGENHLGTA ETKETLADVL VALDRFEEAD
RLYQNILETR RSHYGAEHPS IAQILRRIGT VQIRSDEFAA AYSSYGKALE MFRRLPGDHT
LEIAKLLYYM GQALASRDEL AEATRLHEES LALIRPRLGE DHPQIALAMD ELAFIYQRTG
QYERAGELLR ELRDMHQASQ GERSIGVANV ERELAFLALN LGRCVEASEH AHNSLSILEE
LLPEGHNMIA SAKGNLAYLL DVEGRHEEAE RYHRDSYESY TRAQGSDSLS TYLTAINLAG
SYIDAGALDK AAPLIDELSR QFRAQGEAIS AELDWLPAHF DSVRGSYLAK LGDIAPAESL
LRSAYDSLRE LHGAHRLYTK RALWRLAEVH EQQGDAEQAQ LYRAELGPPP CSAQL