Gene Hoch_2238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2238 
Symbol 
ID8544624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3111624 
End bp3111938 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content63% 
IMG OID646386943 
Productribosomal protein L21 
Protein accessionYP_003266674 
Protein GI262195465 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0261] Ribosomal protein L21 
TIGRFAM ID[TIGR00061] ribosomal protein L21 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0929508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCTG TGATTCAGAC CGGTGGAAAA CAGTATCGCG TCGCCCCGGG CGATACCCTG 
ACGGTCGAGA AACTCCCGGG CAACGTCGGT GACGCGGTCG AGTTCGACAA GGTCCTGCTG
CTGTCCAAAG ACGGTTCGGT TTCGGTTGGC AAGCCCGTCA TCGACGGCGC CAAGGTGACC
GGCAAGATTC TCGAGCACGA CCGCGGCAAG AAACTCGTGG TCTTCAAGTT CGCGCGCCGC
AAGGACTATC GTCGGCGCAA CGGCCACCGC CAGGACTACA CGTCCGTCCA GATCGCGGAC
GTGCTCGCGC CCTAG
 
Protein sequence
MYAVIQTGGK QYRVAPGDTL TVEKLPGNVG DAVEFDKVLL LSKDGSVSVG KPVIDGAKVT 
GKILEHDRGK KLVVFKFARR KDYRRRNGHR QDYTSVQIAD VLAP