| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2227 |
|---|
| Symbol | |
|---|
| ID | 8544613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 3097489 |
|---|
| End bp | 3098427 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 646386932 |
|---|
| Product | diacylglycerol kinase catalytic region |
|---|
| Protein accession | YP_003266663 |
|---|
| Protein GI | 262195454 |
|---|
| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
|---|
| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCAG AGCCACTCCC CGTGCCCCAA CGTCGCGCCC TATTTCTCCG CAACCCCAAC
GCTCGCAACG GCGATGAGCA GGCCGAGAAA GCGCGCGCCT GCTTGGAAGC GCACCGGGTC
GAGCTGGTCG AGGAGGTCGC CGCCGACCCC GAGGGCTTCC GCCTCGCGGT CGAGCAGCGC
GCCTCCGAGG TCGACGTGGT CATCGTCGGT GGCGGCGACG GCACCATCAA CGCGGCCGCG
CCGGCCATCG TCGGCTCGGG CGTACCCATG GCCATCCTGC CGCTGGGCAC GGCCAACGAC
CTGGCGCGTT CGCTGACCAT CGCCAGCGAC CTCGACGAGG CCTGTCGGGT CATCGCCACC
GGCCACCCGC GCGACATCGA CCTCGGCATG GTAAACGGCC ATTACTTCTT CAACGCCGCC
GGCGTCGGTC TCAGCGGCGA GGTCACGCGC AGCCTCGACC GCGAGCAGAA GCGCCGCTGG
GGCGTGCTCA GCTACGCCAG CGTGCTCACC GAGGCGTGGC GGCAGAGCGA GGTCTTCGGC
GCCTGCCTGC GTCACGACGG CAAGGAGACG CGCATCCGCT CGCTGCAGAT CACGGTCGGC
AACAGCCGCT TCTACGGCGG CGGCATGACC ATCGCCGACG ACGCCACCGT CGACGACGGC
CTGCTCCACC TGTACAGCAT CGAGCCCATG TCGCTGATTC AGCTCATCGG CGTCGCGCCG
TTCCTGCGCC TGGGGCGGCA GCGCAACAGC GAGGGCATCC TGACCTTGAA CACCTCCGAG
GTCGAGCTCA TCACCGACCG GCCGCTGCCG GTCAACGCCG ACGGCGAGAT CGTCGGCCGC
ACCCCGGCGC GCTTCTCGCT CATCCCCAAG GCCCTGCAGG TGCTGGTGCC CGAGGACTAC
GAGCAGCGCC GCGCCGAGAT GCTCGGCGGC GCGGGCTGA
|
|---|
| Protein sequence | MIAEPLPVPQ RRALFLRNPN ARNGDEQAEK ARACLEAHRV ELVEEVAADP EGFRLAVEQR
ASEVDVVIVG GGDGTINAAA PAIVGSGVPM AILPLGTAND LARSLTIASD LDEACRVIAT
GHPRDIDLGM VNGHYFFNAA GVGLSGEVTR SLDREQKRRW GVLSYASVLT EAWRQSEVFG
ACLRHDGKET RIRSLQITVG NSRFYGGGMT IADDATVDDG LLHLYSIEPM SLIQLIGVAP
FLRLGRQRNS EGILTLNTSE VELITDRPLP VNADGEIVGR TPARFSLIPK ALQVLVPEDY
EQRRAEMLGG AG
|
|---|
| |