Gene Hoch_2126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2126 
Symbol 
ID8544512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2948834 
End bp2950693 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content70% 
IMG OID646386833 
Productpeptidase M14 carboxypeptidase A 
Protein accessionYP_003266564 
Protein GI262195355 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.520971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTG CCGGCCGTTC GCCTCACGAG ATCCTGGCCT CTGTGGACCA GGGCTTTCGC 
ACCCGTTACC TCGACTACGA CGCACTCACC GCCCAGGTGC AGGCCTGGGC CGGGGCGTTT
CCCGATTTCG TCCGAGTGTC CGCGATCGGG ACCTCGCCGC AGGGGCGCTC GCTGTGGCTC
TTGACCATCG GCCGCGAGCC CGAGCGCACG CGGCCGGCGG TGTGGATCGA TGGCAACATG
CACGCCTCCG AGGTGTGCGG CTCGAGCGTG GCCCTGGCCA TGGCCGAGGA CGTGCTGCGC
CTGCACCTGG ACGCGGCCGC GGATGACGCC CAGGCCGATG CTGATGCCGG GGCCGATGCT
GATGCCGGGG CGGCGCTCTC GGGCGCCGTG GCCGCGCGGG TGCGCGAGGT GCTGTTCTAC
GTGCTGCCGC GCATGTCGCC CGACGGCGCC GAGGCCGTGC TCACGTCGGG GCGCTGGGTG
CGCTCGACGC CGAACGACAC CCGCGCGGAG AAGAACGCGC CGCGCTGGCG GGCCAGCGAT
ATCGACGGCG ACGGCCAGAT GCTGCGCATG CGCGTGCGCG ACCCCGGCGG GGAATTCGTC
GAGTCGTCCG AAATCGCCGG GCTGATGGTG CCGCGCCAGC TCGACGATGA GGGCCCATTC
TACAAGATCT ATCCCGAGGG TGTGATCGAC GGCTACGACG GCCGCTCCAT CCCGACGCCG
ACGCAGGGCT CGGACAATCC CATCGATCTC AACCGCAACT TCCCGTGGAC CTGGGCGCCG
GAGCCGACGC AGGCGGGCGC CGGGCCGTTT CCCCTGAGCG AGCCCGAGTC GCGCGCGGTG
GTCGAGTTCA CCAGCCGTCA TCCGCACATC TTCGCCTGGC TCAACTGCCA CACCTTCGGC
GGCGTGTTCA TCCGCCCCAT GGGCGACCGG CCGGACAACA AGATGAACCC CGATGACCTG
GCGCTGTTCC GCGAGATCGG GGCGTTCTCC GAGCGTCTCA CCGGCTACCC GATGGTCAGC
GGCTTCGAGG ACTTCACCTA CGAGCCGGAC ACGCCGCTGC GCGGCGACCT CAGCGACTAC
GCGTATCATC AGCGCGGCTG CATCGCGTAC GTGGTCGAGC TGTGGGACAT CTTTCGCCAG
GTCGGGTTTC CCCGGGAGCG CTACCGGCGC TTCGTCGATC AGTACTCGCA GTTTTCGCGC
GCCGACCTGG TCGCGCTCGG ACAGTGGGAC CAAAACCACA ACCACGGGCG CATGCTGCGG
CCCTGGGTGG CGTGCGAGCA TCCCCAGCTC GGCGCGGTCG AGGTCGGCGG TCTCGATCCC
CGCGTCGGCC TGTGGAATCC GCCCTACGAG CGCATCGCCG AGATCTGTCG CCAGCAGAGC
GCGGCGTTTC TGCGGGTCGC CGCCATGGCC CCGGCGCTGC GCTGCCAGAC CACGGCGCGC
GTGCCGCTGG GCGAGGGCCT CACGCGGGTG AGCGTGCGCG TCGACAACAG CGGGTACTTG
CCCACCTACG TGCTGTCTTC GGCGCGCGAG CTGCCGTTCA ACGAGCCGAT CTACGCCGAG
CTGAGCGGCG AGGGCTGCGC GCTCGACGAG TCGTGTCCGC CGCGCTGGGA ACTCGGCCAC
CTCGACGGCT GGGGACGCGG CCTGCACGAC GGCACCGGCG CGCTGCACTT TCTCGTGAGT
CGCGGCAATA CCGGGTGTAA GACGCTGTCC TTCGTAGTTC GCGGTCGCGG CACAGTGTCG
TTGCGCGTGG GCTCATGTCG TGTGGGTTGG CTCGAACACC GCGTCGCTGT CGGCGACGAG
GGGGATGTCT CGGGCCGCGA TGACCACGGC GGGACCGCGG ACGGCGGCGC ACGAGCGTAA
 
Protein sequence
MSAAGRSPHE ILASVDQGFR TRYLDYDALT AQVQAWAGAF PDFVRVSAIG TSPQGRSLWL 
LTIGREPERT RPAVWIDGNM HASEVCGSSV ALAMAEDVLR LHLDAAADDA QADADAGADA
DAGAALSGAV AARVREVLFY VLPRMSPDGA EAVLTSGRWV RSTPNDTRAE KNAPRWRASD
IDGDGQMLRM RVRDPGGEFV ESSEIAGLMV PRQLDDEGPF YKIYPEGVID GYDGRSIPTP
TQGSDNPIDL NRNFPWTWAP EPTQAGAGPF PLSEPESRAV VEFTSRHPHI FAWLNCHTFG
GVFIRPMGDR PDNKMNPDDL ALFREIGAFS ERLTGYPMVS GFEDFTYEPD TPLRGDLSDY
AYHQRGCIAY VVELWDIFRQ VGFPRERYRR FVDQYSQFSR ADLVALGQWD QNHNHGRMLR
PWVACEHPQL GAVEVGGLDP RVGLWNPPYE RIAEICRQQS AAFLRVAAMA PALRCQTTAR
VPLGEGLTRV SVRVDNSGYL PTYVLSSARE LPFNEPIYAE LSGEGCALDE SCPPRWELGH
LDGWGRGLHD GTGALHFLVS RGNTGCKTLS FVVRGRGTVS LRVGSCRVGW LEHRVAVGDE
GDVSGRDDHG GTADGGARA