Gene Hoch_2097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2097 
Symbol 
ID8544483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2904604 
End bp2905098 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content63% 
IMG OID646386804 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_003266535 
Protein GI262195326 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0862483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTCG GAAAGCTGCC TGACTCCGGC GGCGACGAAT ACGAGAGCGA CGACGGCAGC 
ATCTTTGCCG AAATCAACAT CACGCCGCTC ACCGACGTCT TCCTGGTGAT GCTCATCATC
TTCATGGTGG TGTCGGCAGC GGCGCTGCAG CGTGAGAAGG ACAAGCTCGA ACGCGTCGCC
GAAGAGATGG AGTCCTCGGA GAGCGCGGGA CTCAAGATCA ACCTGCCCTC CGGTGCGGCG
CAGGAGATCG ATCCTGGCGC GATTTCGCTG GTCGTCACCA TCCCGCCGGA GGGGGCGATC
GTGGTCAACG ACCAGCAGAT CGCCGACGAG AACCAGCTCG ACAACATTTT CCGCAGCGCG
TTTACCCGCG ACAAAGATAC CCAGGTCGTG ATCAAGGCCG ATGCCGGTGT GCACCACGGG
CGCGTGGTTG GCGTGATGGA AAAAGCCAAG CGCGTCGGCC TCACCCGCCT GGCCATTGCG
ACCAGCGGCG GCTGA
 
Protein sequence
MALGKLPDSG GDEYESDDGS IFAEINITPL TDVFLVMLII FMVVSAAALQ REKDKLERVA 
EEMESSESAG LKINLPSGAA QEIDPGAISL VVTIPPEGAI VVNDQQIADE NQLDNIFRSA
FTRDKDTQVV IKADAGVHHG RVVGVMEKAK RVGLTRLAIA TSGG