| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2035 |
|---|
| Symbol | |
|---|
| ID | 8544417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 2805488 |
|---|
| End bp | 2809639 |
|---|
| Gene Length | 4152 bp |
|---|
| Protein Length | 1383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 646386738 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_003266473 |
|---|
| Protein GI | 262195264 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.202066 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCCG GCTCTTTGGT GGCGGATCGC TACGTGATCG AGGCGGTCGC CGGCAGCGGT
GGCATGAGCA CCGTGTACCG GGCTCGCGAC CGTGGCGGCG AGCTCGTGGC GATCAAGGTG
CTCAAGCTGC AGGCCGCGCA TCAGGCCGCG CGCTTTTTGC GCGAGACCAA CCTGCTGTAC
ACGCTGCGCC ATCCCTCGAT CGTCAGCTAT CTCGACAGCG GCCGCATGGA GGAGTCGGGC
CAGTACTTCC TGGTGCTCGA GTGGCTCGAC GGCCAGGATC TGCACAGCTA TCTCGAGCAG
CGCCGCCTCG ATGTGCGCGA GAGCCTGGCG CTGGCCGAGC GCATCGCCGA CGCGCTCGGG
TTTGCCCACG CCCGCGGCGT GGTCCACCGC GACGTCAAGC CCGAAAATAT CTTTTTGCCC
GGAGGGCTGC TGTCGCAGGC CAAGCTGCTC GATTTCGGCA TCGCCCGCTG GGCCGAGGCC
GTGGATTCGC TCACCCGCAC CGGCGCGCGC TTCGGCACGC CCGCGTACAT GTCGCCCGAG
CAGGTGCGCG GCGACCGCGA TCTCGACGTC CGCGCCGATG TGTTCTCGCT CGGCTGTGTG
CTCTACGAGT GCGTGGCCGG CGAGCCCGCC TTTGCGGCCA CCGACCCGAT GGCCGTGTTC
GGCAAGATCC TGTTCGACGA TCCGCCGCGG GTGTCGGCGC TGGTGCCCAA TGTGCCCAAG
GCGCTGGAGA CGCTGCTCGA GCGCATGATG GCGCGCGAGC CGTCCGAGCG TCCGATTTCG
GGCGATGCGC TGGCGGTCGA GCTGCGCGAG CTACAGCAAC TGCTCGAGCG CGCGCCGGCG
CGGCGGCGAG GGCGGAACGC GTTTCGGCGC AACACGCTCA CGGATCTCGA ACAGCGGCTG
GTGAGCGTGG TCGTGGCCAC GGTGGACAGC GCCGCGCACG AGGCCGCCCT GCTGCTGTCG
GACCGCGATG GCGAAGGCGA CCCGGAGGAC ACCGAGGATA ACGAGGTCCA CCAGGACAGC
GCGGACAACC AGAACCGCGA GGGGCCGGGG CACCGCGCGT CCGGCACGGA CGCGGACGAC
GGCGACATCT CGGCGCCGAG CGGGAACATC GACACCCAGG CCGACACCCA GGCGGGCACC
GGGGTGGACG AGATCCTGCC CGGTCTGGCC CTGCCGAGCG CCCTGGACGC GGCGGTGCGT
GCCGAGCTCG AGCCGCTGGG CGCGCGCGTG GGCCTGCTGC AGAGCGGGCT GTTGGTGGCC
GTGCTCGAGC ACCGGGTGAG CTCGATGCAT CGCACCGCGG CCGATCAAGC GGCGCAGGCG
GCGCGCGCGG CGCTGTCGCT GCGGCGCAGC GTGCCCGACG CGCCCATGGC CCTGGCCACG
GGTCGGGCCG TGGTTCAGCA GCGCCGCCTC ATCGGCGAGG TCATCGACCG CGCCGTGAGT
TTGCTCGGAC AGTCGGTCGA CGATGCCGAG AGCGCGCGCG AAGGCGGCGA CGCGCCCGGG
CCCGAGGACG CTCCGGGGCG CGAGATCCGC ATCGACGAGG TCACGGCCGG GCTGCTCGGC
GGGCGCTTCG CGGTCACCCG CAGCGAGGGC GGGGCGCTGT ATCTGGGCGC GCCGCCGAGC
GCGGGCGCGG CCCCGGCGAC CGCGCGCAGC TCGCCCTTCG TCGGCCGCAT CAGCGAGGTG
GCGACGCTGA CGGCGACCCT CGACGAGTGT CTCGAGGAGC ACATCGCCCG CGGCCTGCTG
GTCACCGGGC CGGCCGGGTT TGGCAAGTCG CGGCTGCTGC GCGAGTTCAT GGAGCGGGTG
CGCGGCCGCG GCGTGCTCGA GGGCGGCGAC GACGCGGTCG AGGTGTGGAT CGCGCAGGGT
GACCCGATGC GCGCGGGTTC GCCGCTGCAT CTGTTTTCGG ACGCGCTGCG TCGCACGGTG
GCGATCGCCG ACAGCGAGCC GCCCGCGCGC CGGCGCGAGA AGCTGCGCCG CTACGTCGGC
CGCCAGCTCG CGGATGAGCA CCAGCACCGC GTGGCCACCT TCCTGTGCGA GCTTCTGCGC
ATCGGCGAGA GCGACGACGG CGGCGACGTG CAGCTTCGCG CGGCGCGCAA CGACGCGCTG
CTGATGGGCG ACCAGGTGCG CCGAGCCTGT GGCGATCTGC TCGACGCCGA GACCCGGCAG
CGGCCGCTGT TGTTCGTGAT CGAGGATCTG CACTGGGGCG ACCGCGCCAC CATCGACGTG
CTCGACCTGG CCATGCGCAA TCTGTCCGAG CGTCCGTTTT TGGTGCTGGC GCTGGGTCGG
CCCGAGGTCC ACGACCTGTT CCCGACCCTG TGGGACGGCC ACAATCTCAC GGAGATCCGG
CTCAGCCGGC TGTCGCGGCG CGCGGCCCAG AAGCTGGTGC GCGCCGGGCT CGGCGACGAC
GCCGACGACG CCCGCGTGGC CGATCTGATC GAGCGCGGCG ACGGCAACCC CTTCTACCTC
GAGGAGCTGG TGCGGCGGGT GTCGGCCGGG CACGTGACCC TGCCCGACAC GGTGATGGCC
ATGGTCCAGG GCCGGCTGAG CGCGCTCGAC TCGCAGGCGC GGCGGGTGCT GCGCGCGGCC
AGCGTGTTCG GCGGCACCTT CTGGAGCGGC GGCGTGGCCG CGCTGGTGGG CGACGACACG
CCGGTGGTGC GCTGGCTCGA GACCCTGCTC GAGCTGGGCA TCATCTCGGC GACCTCGGGC
GCGCGCTTCG CCGGCGAACA GGAGTACGAG TTTCGCCACG CGCTCATCGG CGAGGTCGCC
TACGACATGC TCACCGAGGA GGATAAGCGC CTGGGCCACA CCCTGGCCGG GCGCTGGCTC
ATGGCCCACG GCGAGCAGGA CGCGCGGCTT TTGGCCGAGC ACTTCGAGCG CGGCGGCGAG
CCGGCCGAGG CGCTGCCGCA CTATCTGCGC GCGGCCAGCG ATGCGCTCGA CCGCAGCGAC
TTCGACGCCG CGGTGACCGC GGCCGAGCGC GGCATCGCGT GCGGCGCCGA GGGCACCGCC
TTGGGCGGGC TGCGGCGGGT GCTGATGGAG GAGCGGGTGT GGCGCGGCAA CCCCACCGAG
GTGATCGCGC AGGGCGAGGA CGCGCTGCGC CACCTGGAAC GCGGCTCGCG GGCCTGGTTC
GACGTCGCCG GCGAGCTGGC CACGGCCTAC GGCAAGCGCG AGGATATGGT CTTGGTCGAA
CACGTGGCCG AAATTATCGA GGGCGAGGCC AGCGAAGTCG GACACGCGCC CGGGCGGCAC
ATCGCGCTGT CCAAGGTGGC GCAGGTGATG TTCGCGTGCG GGCAGCGCGC GGGCGCCGAG
CGGCTGCTGG CGCTGCTCGA GAGCGAGGTC GGCGCGCTCG CCCAGGTCGA CCTGGTGGTC
GCGGCCAACG TGCACTTCGC GCGCGCCTTC CAGGCCAACA CCGCGCTCGC CGACCCCGCG
GCCGTGCTGC TCGAGACCGA GCGCTGCGCG ACCGCGTTCG AGGCCATCGG CGACGCCCGG
CAGGCGTGTC TGCACCGCAC CAACGTCGGC TACGCCAAGC TCGAGCTGGG CCTGTTCGCC
GAGGCCGAGG CCGATCTGCG CGCGGTGCTG GCGACGGCCG AGCGCATGGC CATCGATCTG
GTGGCCAACA CCGCGCGGCA GAATCTGGCG CTGGCCTGCG CCCACCAGGG CGCCACCGAC
GAGGCCCGGC GGCTGGCGCG CCAGGCCTGC GCGTGGTTCG AGGGCCGCGA GGACGCGCCC
CGGGAGCTCG CCCAGGCGCA CCTGTACCTG GCCGTGGTGC TGCTGCTCGC GGGCGACGCC
TCGGGCGCGG CGGACGAGAT CCGGACCTCG CTGGAACAGT TGTCCGAAGC GGCTCCGCTG
CGCGGCTACG CGCTGGCCGT GCACGCGCGG CTGGCGTTGA TGCACCGCGC CGTGGGCGAT
GCCCTGGTCG CTGCCGAGGA GGCCCATCGC CTGCTGGCCG CGCAGAGCAG CGTGGAGAGC
GGCGAGGCCA CGATTCGCCT GGTGCTGGTC GAGGCGCTGG CCGCGGCCGG CTATGAAGAC
CGCGCGCACC ACGCTCTGGC CGAGGCCCGG CGCGCGCTTC TCGACCGCGC GGACAAGATC
AGCCGTCCGG ATTGGCGGCA GAGCTTTCTC GAAAATATCC CCGACCACGT GCGCACCTTG
GCGGCGGTGT GA
|
|---|
| Protein sequence | MQPGSLVADR YVIEAVAGSG GMSTVYRARD RGGELVAIKV LKLQAAHQAA RFLRETNLLY
TLRHPSIVSY LDSGRMEESG QYFLVLEWLD GQDLHSYLEQ RRLDVRESLA LAERIADALG
FAHARGVVHR DVKPENIFLP GGLLSQAKLL DFGIARWAEA VDSLTRTGAR FGTPAYMSPE
QVRGDRDLDV RADVFSLGCV LYECVAGEPA FAATDPMAVF GKILFDDPPR VSALVPNVPK
ALETLLERMM AREPSERPIS GDALAVELRE LQQLLERAPA RRRGRNAFRR NTLTDLEQRL
VSVVVATVDS AAHEAALLLS DRDGEGDPED TEDNEVHQDS ADNQNREGPG HRASGTDADD
GDISAPSGNI DTQADTQAGT GVDEILPGLA LPSALDAAVR AELEPLGARV GLLQSGLLVA
VLEHRVSSMH RTAADQAAQA ARAALSLRRS VPDAPMALAT GRAVVQQRRL IGEVIDRAVS
LLGQSVDDAE SAREGGDAPG PEDAPGREIR IDEVTAGLLG GRFAVTRSEG GALYLGAPPS
AGAAPATARS SPFVGRISEV ATLTATLDEC LEEHIARGLL VTGPAGFGKS RLLREFMERV
RGRGVLEGGD DAVEVWIAQG DPMRAGSPLH LFSDALRRTV AIADSEPPAR RREKLRRYVG
RQLADEHQHR VATFLCELLR IGESDDGGDV QLRAARNDAL LMGDQVRRAC GDLLDAETRQ
RPLLFVIEDL HWGDRATIDV LDLAMRNLSE RPFLVLALGR PEVHDLFPTL WDGHNLTEIR
LSRLSRRAAQ KLVRAGLGDD ADDARVADLI ERGDGNPFYL EELVRRVSAG HVTLPDTVMA
MVQGRLSALD SQARRVLRAA SVFGGTFWSG GVAALVGDDT PVVRWLETLL ELGIISATSG
ARFAGEQEYE FRHALIGEVA YDMLTEEDKR LGHTLAGRWL MAHGEQDARL LAEHFERGGE
PAEALPHYLR AASDALDRSD FDAAVTAAER GIACGAEGTA LGGLRRVLME ERVWRGNPTE
VIAQGEDALR HLERGSRAWF DVAGELATAY GKREDMVLVE HVAEIIEGEA SEVGHAPGRH
IALSKVAQVM FACGQRAGAE RLLALLESEV GALAQVDLVV AANVHFARAF QANTALADPA
AVLLETERCA TAFEAIGDAR QACLHRTNVG YAKLELGLFA EAEADLRAVL ATAERMAIDL
VANTARQNLA LACAHQGATD EARRLARQAC AWFEGREDAP RELAQAHLYL AVVLLLAGDA
SGAADEIRTS LEQLSEAAPL RGYALAVHAR LALMHRAVGD ALVAAEEAHR LLAAQSSVES
GEATIRLVLV EALAAAGYED RAHHALAEAR RALLDRADKI SRPDWRQSFL ENIPDHVRTL
AAV
|
|---|
| |