Gene Hoch_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2016 
Symbol 
ID8544398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2781027 
End bp2781857 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content71% 
IMG OID646386719 
ProductMethyltransferase type 11 
Protein accessionYP_003266454 
Protein GI262195245 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.544717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCTT CCGAACCCAA CTGGAACGAT ATCGAAGGCT CGGGTGACGC CGACTACTTC 
GTCGGCTATC TCGACACCGC CACGGCGCAG AGCGAGATGC AGCGCTACAA GCGCCGCACC
TACGAGCTGC TCGGGCTGAG GCCGGGCGCG CGCGTACTCG ACGCCGGCTG CGGCACCGGC
GACGATGTCA TCGAGCTGGC CGGCCTGGTC GGCGAAGAGG GCCGCGCCGT GGGTCTCGAC
AACAGCCAGG CCATCGTCGA CGAGGGCCGC GCGCGCGCCC ATCGCGCCGG GGTGGCGGCC
GAGTTCCACG TCGGCGACAT CGCCGAGCTG CCGTTTCCCG ACCACGCGTT CGACGCCGTG
CGCGCCGACC GGGTGCTCAT GCATATCCCC GATCGCGAGC GCGCGCTGTC CGAGCTGGTG
CGGGTGACGC GGCCGGGCGG ACGCGTGGTC GTGCGCGAGC CCGACTGGGA CACCATGATC
GTCGATGGCG GCGATCCGCT GTTCGCGCGC CGCCTGGTGC ACCAGCACTT CGACCGCGTC
ATCCGCCATC CCCAGGCCGG CCGGGCGCTG TTCGGCATGT GCCAGCGCGC GGGTCTCTCG
GCCGTGCACG TGGCCGACAC CTCGACCCTG ATCATCACCG AGCTGGCCAC GGCCCACAAG
CTCTACGGGC TCGACGCGGC CGTGGAGTGG ATGTGCGCGC ACGAGCCGAA CGCGGCCGTA
GAGGCGCGCG CCTGGCTGGC GCAGCTCGAA GTCGCCGACC GCAGCGGCAG CTTCTTCAGC
GCGGTCACCG GCTTCACCGT GGTCGGCAAG AAGCCGGGCG TCCGCAGCTA A
 
Protein sequence
MNSSEPNWND IEGSGDADYF VGYLDTATAQ SEMQRYKRRT YELLGLRPGA RVLDAGCGTG 
DDVIELAGLV GEEGRAVGLD NSQAIVDEGR ARAHRAGVAA EFHVGDIAEL PFPDHAFDAV
RADRVLMHIP DRERALSELV RVTRPGGRVV VREPDWDTMI VDGGDPLFAR RLVHQHFDRV
IRHPQAGRAL FGMCQRAGLS AVHVADTSTL IITELATAHK LYGLDAAVEW MCAHEPNAAV
EARAWLAQLE VADRSGSFFS AVTGFTVVGK KPGVRS