| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1956 |
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| Symbol | |
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| ID | 8544338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 2697317 |
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| End bp | 2698789 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646386660 |
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| Product | UDP-N-acetylmuramoylalanine/D-glutamate ligase |
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| Protein accession | YP_003266395 |
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| Protein GI | 262195186 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.204769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.223034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCA ACTTCGAAAC CTCCCTGCGC GGCAAGCGCG TGCTCGTCGT CGGCCTGGCG
CAGACCGGCG TGTCCGTGGC CCGCTTCTGC GCCTCGCGCG GCGCCAGCGT CACGGTTACC
GACGCCAAGT CTGCAGACCT GCTGGCCGAT CGGGTGCGCC AGCTCGACGG CTGCGCCGCG
CTCGAGCTCG GCAGCCACGT GCTCGAGAGC TTCACGGGCG CCGACTACGT GCTCATGTCG
CCGGGCGTGC CCGAGCTGCC CGAGATGCAG GCCGCGCGCG ACGCCGGCGC CGAGGTCATC
GCCGAGATCG AGCTGGCCTA TCGCTGCCTG CACCCCGAGG CGCAGCTCAT CGCCATCACC
GGCACCAACG GCAAATCCAC GACCACGGCG CTGACCGGGG CGCTGTGTCA GGCGGCCTCG
GACGCGGGCG CGCCGCCGAC CTTCTGCGGC GGCAACCTGG GCAATCATCC GCTGATCGAG
GCCGTCGACC ACCCGGCCAA CACCGCGGGC GGGTTCGTGG TCGCCGAAGT GGCCGGCTTC
ATGCTCGAGA CCTGCGCCGG TTTTCGCCCA AACGTGGCCG CGTGCCTCAA CATCACCGAA
GATCATCTCG ACCGCTACGG GACCATGGAC GTCTACGCCT CGATGAAGAC GCGCGTCTAC
CGCTGGCAGC GCGCCGATGA TTTCGCCATC GCCAACGCCC ACTGCGCGCG CACGCTCGCG
GGCGCCCAGG CGGCGGCCGG GCGGGTGCTG GTGTTCGACG CCGAGGCGCC GCTGCCGCCC
GGCACCTGCG GCGCGTATCT GTCGCCCGAG CGCGACGAGA TCGTGCTGCG CCCCGAGGCC
GACGGACCCG AGCATCGCTT TCCCGCGGCC GACCTGCCGC TGATCGGCCA GCACAACCTC
GAGAACGCCA TGGCCGCGTA CCTGGCGGCG CATCTCGTCG GCGTGTCCGA CGACGCGATC
CGCGCTGGAG CGCGCAGCTT TCGGCCGCAG AAGCACCGCA TGGAGCGCGT CGGCGAAAAG
GGCGAGGTGG TGTTCTACGA CGACTCCAAG GGCACCAACG TGGCCGCGGT GGCGGCGTCG
ATGCGCGGCT TCCCCCGGCC CGCGGTGCTG ATCGCGGGCG GCGTGGACAA GGGCGGCTCG
TACGCGCCCA TGTTCGAGGC GCTGCGCGAT GTGGCCCGCG GCCTGGTGCT CATCGGTGAG
GCCCGGCCGC TGATCCGCGC GGCCGCGAGC GAGGCCGGCG CCGCGTATCC CGTGGTCGAC
GCCGAGAGCA TGGAAGACGC CGTGCGCAAG GCCGCCGCGC TGGCCCGCGC CGGCGACGCG
GTGGTGCTGT CGCCCGCGTG CTCTAGCTAC GACATGTTCC GCAACTTTGG CGAGCGCGGC
ATGGCGTTTC GCGACGCGGT GAGCGCCATC GGCGGCCGCC GTCTGGATAT CGATACCGAT
CTGGTCTCAG CGTCCGAGAA AGGAGATGCC TAG
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| Protein sequence | MATNFETSLR GKRVLVVGLA QTGVSVARFC ASRGASVTVT DAKSADLLAD RVRQLDGCAA
LELGSHVLES FTGADYVLMS PGVPELPEMQ AARDAGAEVI AEIELAYRCL HPEAQLIAIT
GTNGKSTTTA LTGALCQAAS DAGAPPTFCG GNLGNHPLIE AVDHPANTAG GFVVAEVAGF
MLETCAGFRP NVAACLNITE DHLDRYGTMD VYASMKTRVY RWQRADDFAI ANAHCARTLA
GAQAAAGRVL VFDAEAPLPP GTCGAYLSPE RDEIVLRPEA DGPEHRFPAA DLPLIGQHNL
ENAMAAYLAA HLVGVSDDAI RAGARSFRPQ KHRMERVGEK GEVVFYDDSK GTNVAAVAAS
MRGFPRPAVL IAGGVDKGGS YAPMFEALRD VARGLVLIGE ARPLIRAAAS EAGAAYPVVD
AESMEDAVRK AAALARAGDA VVLSPACSSY DMFRNFGERG MAFRDAVSAI GGRRLDIDTD
LVSASEKGDA
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