Gene Hoch_1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1953 
Symbol 
ID8544335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2691640 
End bp2692851 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content66% 
IMG OID646386657 
Producthypothetical protein 
Protein accessionYP_003266392 
Protein GI262195183 
COG category[S] Function unknown 
COG ID[COG4399] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.577972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.120889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACTTCA GCTTGCAAGA CCTCTTGGTT CTGCTGATCC CCGTCGTGAG CGCGGTGGTC 
GGCTGGGCGA CCAACGTGGT GGCGATCAAG ATGATGTTCT ATCCGGTGGA CTTCGTCGGC
GTGTGGAAGC TCGGCTGGCA GGGCATCGTG CCGGCCAACG CCACCCGCAT GGCCTCGGCC
TCGACGCAGA TCATCACCGA GAAGCTGCTG CGGCTCGACG AGCTGTTCGC GAACTTCGAC
GCCGAGCACT TCACCGGCGC GCACCTCGAA GAGGTCATGG ACGAGACCGT CGAGCAGGTG
ATCGAGGAGA CCGCGGCCAA GTACGCGCCC GAGATGTGGG CCGGCGCGCA GGAGGCTGCC
AAGGGCCACG TGCGCCAGAT GGTGCGCGCC GATGTCGAGC GGGTGCTCAG CGAGATCCTG
GCCGAGGTCG GCACGCAGAT CGAGGACATC CTCGACCTCG AGGCCATCGT GGTCGATACC
GCCGAGCGCG ACCGCGCCAT CATCGGCGAG ATGTTCCAGA CCGTGGGCGC CAAGGAGTTC
GACTTCATCC GCCGCTCGGG CGGCTACTTC GGCTTCCTCT TCGGCCTGGT GCAGCTCGGC
GCGTGGCTGC TGTGGCCCGA GTGGTGGCTG CTGCCCACCT TTGGCTTCTT CGTCGGCTAC
GTGACCAACT TTCTGGCGCT CAAGCTCATC TTCGAGCCGG CCGAGCCCAA GCGGATCGGG
CCGTGGACGC TGCAGGGCCT GTTTCACAAG CGCCAGGCCG TGGTCGCCGA GGAGTTCTCC
AAGATGGTGT CGCGCGACAT CCTCAACCCG GAGAACATGG TCAGCAAGAT GATCTCGGGG
CCGGGCGGCG ACAAGCTGTT CGCCATCGTC ACCCGCCACG TCGATGCCCT GGTCACCCGC
TACGCGCAGA ATCCGCTCAT CGGCGCCATG ATCCCGGCCG ACAAGTGGGA CGAGGCGCGC
GTCGAGCTGC ACCGCCGCCT GCGCGAGGAG CTGCCCAAGC CGGGCGGCTT CCTGCACGTG
TTCGCGCGCG AGGCGGTCGA CATCTACAGC GAGCTGGTCG AGCGCATGGT CGATCTCGAC
GCCAAGAGCT TCGAGGGCAT CCTGCGGCCG CCCTTCCAGC AGGATGAGTG GAAGCTGATC
ATCGCCGGCG GCGTGCTGGG TCTCGGCGCC GGTCTGCTGC AGCTCCTGTA TCTGCTCGGC
GAATCCGTGT AG
 
Protein sequence
MNFSLQDLLV LLIPVVSAVV GWATNVVAIK MMFYPVDFVG VWKLGWQGIV PANATRMASA 
STQIITEKLL RLDELFANFD AEHFTGAHLE EVMDETVEQV IEETAAKYAP EMWAGAQEAA
KGHVRQMVRA DVERVLSEIL AEVGTQIEDI LDLEAIVVDT AERDRAIIGE MFQTVGAKEF
DFIRRSGGYF GFLFGLVQLG AWLLWPEWWL LPTFGFFVGY VTNFLALKLI FEPAEPKRIG
PWTLQGLFHK RQAVVAEEFS KMVSRDILNP ENMVSKMISG PGGDKLFAIV TRHVDALVTR
YAQNPLIGAM IPADKWDEAR VELHRRLREE LPKPGGFLHV FAREAVDIYS ELVERMVDLD
AKSFEGILRP PFQQDEWKLI IAGGVLGLGA GLLQLLYLLG ESV