Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1953 |
Symbol | |
ID | 8544335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 2691640 |
End bp | 2692851 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 646386657 |
Product | hypothetical protein |
Protein accession | YP_003266392 |
Protein GI | 262195183 |
COG category | [S] Function unknown |
COG ID | [COG4399] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.577972 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.120889 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAACTTCA GCTTGCAAGA CCTCTTGGTT CTGCTGATCC CCGTCGTGAG CGCGGTGGTC GGCTGGGCGA CCAACGTGGT GGCGATCAAG ATGATGTTCT ATCCGGTGGA CTTCGTCGGC GTGTGGAAGC TCGGCTGGCA GGGCATCGTG CCGGCCAACG CCACCCGCAT GGCCTCGGCC TCGACGCAGA TCATCACCGA GAAGCTGCTG CGGCTCGACG AGCTGTTCGC GAACTTCGAC GCCGAGCACT TCACCGGCGC GCACCTCGAA GAGGTCATGG ACGAGACCGT CGAGCAGGTG ATCGAGGAGA CCGCGGCCAA GTACGCGCCC GAGATGTGGG CCGGCGCGCA GGAGGCTGCC AAGGGCCACG TGCGCCAGAT GGTGCGCGCC GATGTCGAGC GGGTGCTCAG CGAGATCCTG GCCGAGGTCG GCACGCAGAT CGAGGACATC CTCGACCTCG AGGCCATCGT GGTCGATACC GCCGAGCGCG ACCGCGCCAT CATCGGCGAG ATGTTCCAGA CCGTGGGCGC CAAGGAGTTC GACTTCATCC GCCGCTCGGG CGGCTACTTC GGCTTCCTCT TCGGCCTGGT GCAGCTCGGC GCGTGGCTGC TGTGGCCCGA GTGGTGGCTG CTGCCCACCT TTGGCTTCTT CGTCGGCTAC GTGACCAACT TTCTGGCGCT CAAGCTCATC TTCGAGCCGG CCGAGCCCAA GCGGATCGGG CCGTGGACGC TGCAGGGCCT GTTTCACAAG CGCCAGGCCG TGGTCGCCGA GGAGTTCTCC AAGATGGTGT CGCGCGACAT CCTCAACCCG GAGAACATGG TCAGCAAGAT GATCTCGGGG CCGGGCGGCG ACAAGCTGTT CGCCATCGTC ACCCGCCACG TCGATGCCCT GGTCACCCGC TACGCGCAGA ATCCGCTCAT CGGCGCCATG ATCCCGGCCG ACAAGTGGGA CGAGGCGCGC GTCGAGCTGC ACCGCCGCCT GCGCGAGGAG CTGCCCAAGC CGGGCGGCTT CCTGCACGTG TTCGCGCGCG AGGCGGTCGA CATCTACAGC GAGCTGGTCG AGCGCATGGT CGATCTCGAC GCCAAGAGCT TCGAGGGCAT CCTGCGGCCG CCCTTCCAGC AGGATGAGTG GAAGCTGATC ATCGCCGGCG GCGTGCTGGG TCTCGGCGCC GGTCTGCTGC AGCTCCTGTA TCTGCTCGGC GAATCCGTGT AG
|
Protein sequence | MNFSLQDLLV LLIPVVSAVV GWATNVVAIK MMFYPVDFVG VWKLGWQGIV PANATRMASA STQIITEKLL RLDELFANFD AEHFTGAHLE EVMDETVEQV IEETAAKYAP EMWAGAQEAA KGHVRQMVRA DVERVLSEIL AEVGTQIEDI LDLEAIVVDT AERDRAIIGE MFQTVGAKEF DFIRRSGGYF GFLFGLVQLG AWLLWPEWWL LPTFGFFVGY VTNFLALKLI FEPAEPKRIG PWTLQGLFHK RQAVVAEEFS KMVSRDILNP ENMVSKMISG PGGDKLFAIV TRHVDALVTR YAQNPLIGAM IPADKWDEAR VELHRRLREE LPKPGGFLHV FAREAVDIYS ELVERMVDLD AKSFEGILRP PFQQDEWKLI IAGGVLGLGA GLLQLLYLLG ESV
|
| |