| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1946 |
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| Symbol | |
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| ID | 8544328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 2680460 |
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| End bp | 2683132 |
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| Gene Length | 2673 bp |
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| Protein Length | 890 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646386650 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_003266385 |
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| Protein GI | 262195176 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.197292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00683804 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGCCG CACAGGTCAG GTCGAGCTTC CTGGATTTCT TCGCTGCGCG CGGCCACGAG
CGTGTGCACT CTGCCTCGCT GGTGCCGGTG GGCGATCCCA CCCTGCTGTT CACCAACGCC
GGTATGGTGC CGTTCAAGGA CGTGTTCACG GGGCATCAGA CCCGCGCCAT CCCGCGGGCG
ACCTCGTCGC AGAAATGCGT GCGCGCCGGC GGCAAGCACA ACGACCTCGA TCAGGTGGGC
AAGACCGCGC GTCACCACAC CTTCTTCGAG ATGCTGGGCA ACTTCTCCTT CGGCGATTAC
TTCAAGAAGG ACGCTATCGC CTGGGCCTGG GAGCTGCTCA CCGAGGTCTA CGGCATCGAC
AAGGAGCGCC TGGTGATCAC GGTGTTCGCC GGCGACAGCG AGCTGGGCGT GGGCGCCGAC
GACGAGGCGC GCGCCATCTG GGGCGAGGTC ACCGGGATGC CGTCCGAGCG CATCATCGGC
CTGGGCAAGT CCGAGAACTT CTGGATGATG GGCGAGACCG GGCCGATGGG GCCGTGCTCG
GAGATCCACT ACTTCGGCGC CGGCAAGCCC GACGCGCTGC CCGGCACCGA CCCCGACGCG
CCGGTGTGGA GCGGCTGGCT CGAGATCTGG AACCTGGTGT TCATGCAGTA CGAGCGCCGC
GAGCCCGGCG GCGCCTTGCA CAAGCTGCCG GCGCCGTCGA TCGATACCGG CGCCGGGCTC
GAGCGCGTGA CCTCGGTGTT GCAGGGCGTC TCGTCGAACT ACGACACCGA CCTGTTCCAG
CCGCTCCTGC ACAGCGCGGC CGAGCTGTGC GGCAAGCGCT ACGGCGAGGA CGGCGACGCC
GACACCTCGA TGCGCGTGAT CGCCGACCAC GCCCGCGCCA CCGCGTTCCT GGTCGCCGAC
GGCGTGTTCC CGGACAAGAC CGACAAGGAG TACGTGCTGC GGCGCATCTT CCGCCGCGCC
GTGCGCCACG GCAAACTGCT CGGCATCGAG GAGCCGTTCA TGCACCGCAT GTGCGCCCGC
GTGGTCGAGG AGATGAAAGA CGCGTATCCC GAGCTGGCCG AGCGCGCCAC CGTCATCCAC
GAGATCACGC TCGAGGAGGA GAAGCGCTTC CGCGCCACCC TCGACCGCGG CCTCAACCTG
CTCGAGGAGG AGTTCGGACG CATGCAGGCG GCGAAGTCGT CCACCGTGTC CGGCGATAAG
GTGTTTCAGC TCTACGACAC CTACGGCTTC CCCAGCGACC TCACCGAGAT CATCGCCGAC
GAGCACGGCT ACGGCATCGA CCACGAGGGC TTTCGCGAGG AGCTGGAGCA GGCCCGCGAG
CGCTCCAAGG CCGCGCACAG CACCGGCGTC GGCGAGGGCG AGGTGTTCAA GACCCTGGCC
GGCGAGCTCG GCGCCACCAG CTTCCTGGGC TACGAGGGCG AGGGCCTGAG CGGCAGCGGC
CAGGTCATGG CCCTCGTGGT CGACGGCGAG CGCGTGGAGC GCGCCGAGGC CGGCGCGCAG
GTGGCCTTTG CCTGCGACCA GACGCCGTTC TACGCCGAGT CCGGCGGCCA GATCGGCGAC
TGCGGCGAGG CCCGCAGCGA GGCTGGCGCG CGCGTGCGCA TCGACGACAC GCGCAAGCCC
TCGGGCGACA CCTTCGTGCA CATCGGCGAG GTGCTCGAGG GCGCGATCGC GCTCGGCGAC
CAGCTCGGGT TCGAGGTCGA CGGCGAGCGC CGGGCGCGCA TCCGGGCCAA CCATTCGGCC
ACTCACCTGC TGCATCTCGC GCTCAAGAAG ACCTTGGGCG ACCACGTGGC CCAGAAAGGT
TCGTCGGTGG GGCCGGATCG CCTGCGCTTC GATTTCGCTC ACTTCAGCCC GATGAGCGAC
GAGCAGACCC AGCAGGTCGA GGACTGGGTC AACGCCGAGA TCCGCAAGAA CCGCGACTCG
GTCACCGACG TGATGTCGCT GTCCGAGGCC AAAGAGCGCG GCGCCGTGGC CATGTTCGGC
GAGAAGTACG GCGACAAGGT ACGCGTGGTC GGCATCGGCT CGGAGTCGCT CGAGTTCTGC
GGCGGCACCC ACGTGCACCG CGCCGGCGAC ATCGGTCTGT TCAAGATCGT GAGCGAGTCG
AGCGTGGCCC AGGGCGTGCG CCGCATCGAG GCGGTCACCG GCGCGGGCGC GCTCGAGTAT
GTGCGCCGCG TCGAGGGCGA GCTCAGCGCG GTCGGCGGGC GGCTCAAGGT GGCGCCGCTC
GAGGTCGCCG GACGCGTGGA CAAACTCCAG GAGGAGCTGC GCGCGCGCGA GCGCGAGGTC
GCCGAGCTCA AGGCCAAGCT GGCGGCGGGC GGCTCGCGCG ATCTCATGAG TGAGGTCGAG
GAGATCGCCG GCGTCAAGGT GCTGGCGGTG GCCACCGAGG TCGATGACGC CAAGACCCTG
CGCACCACGG GCGATACGCT GCGCGACCGG CTGGGCTCGG GCGTGCTGCT GCTGTGCGGC
GTGGGCGAGG ATAAGGTCGC GCTGCTGGCC ATGGTGAGCA AGGACCTCAC CAAGCGCGTG
CACGCCGGCA AGCTGCTGCA GGCGGTGGCC GAGACGCTCG GAGGACGCGG GGGTGGGCGG
CCCGATATGG CGCAGGGCGG GGGGAAGGAT CCGAGCCAGG TGCCGGCGGC TCTGGAGCGG
GCGCGTAGCT TTTTGAATGA TGCGCTCGCC TGA
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| Protein sequence | MKAAQVRSSF LDFFAARGHE RVHSASLVPV GDPTLLFTNA GMVPFKDVFT GHQTRAIPRA
TSSQKCVRAG GKHNDLDQVG KTARHHTFFE MLGNFSFGDY FKKDAIAWAW ELLTEVYGID
KERLVITVFA GDSELGVGAD DEARAIWGEV TGMPSERIIG LGKSENFWMM GETGPMGPCS
EIHYFGAGKP DALPGTDPDA PVWSGWLEIW NLVFMQYERR EPGGALHKLP APSIDTGAGL
ERVTSVLQGV SSNYDTDLFQ PLLHSAAELC GKRYGEDGDA DTSMRVIADH ARATAFLVAD
GVFPDKTDKE YVLRRIFRRA VRHGKLLGIE EPFMHRMCAR VVEEMKDAYP ELAERATVIH
EITLEEEKRF RATLDRGLNL LEEEFGRMQA AKSSTVSGDK VFQLYDTYGF PSDLTEIIAD
EHGYGIDHEG FREELEQARE RSKAAHSTGV GEGEVFKTLA GELGATSFLG YEGEGLSGSG
QVMALVVDGE RVERAEAGAQ VAFACDQTPF YAESGGQIGD CGEARSEAGA RVRIDDTRKP
SGDTFVHIGE VLEGAIALGD QLGFEVDGER RARIRANHSA THLLHLALKK TLGDHVAQKG
SSVGPDRLRF DFAHFSPMSD EQTQQVEDWV NAEIRKNRDS VTDVMSLSEA KERGAVAMFG
EKYGDKVRVV GIGSESLEFC GGTHVHRAGD IGLFKIVSES SVAQGVRRIE AVTGAGALEY
VRRVEGELSA VGGRLKVAPL EVAGRVDKLQ EELRAREREV AELKAKLAAG GSRDLMSEVE
EIAGVKVLAV ATEVDDAKTL RTTGDTLRDR LGSGVLLLCG VGEDKVALLA MVSKDLTKRV
HAGKLLQAVA ETLGGRGGGR PDMAQGGGKD PSQVPAALER ARSFLNDALA
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