| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1938 |
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| Symbol | |
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| ID | 8544320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 2665001 |
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| End bp | 2669041 |
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| Gene Length | 4041 bp |
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| Protein Length | 1346 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646386642 |
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| Product | serine/threonine protein kinase |
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| Protein accession | YP_003266377 |
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| Protein GI | 262195168 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.24353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0612241 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATC CTGCGACACG CTCGGGTCAG TGGCTCGACA AGCGCTTCGA ACTCGAGCGC
CAGGTCGCCT CGGGCGGCAT GGGACGCGTG TTCCTGGCCC GCGATCACCT CACCGACCAG
CCGGTCGCGG TCAAGCTGCT GGCCCGCCCC GACAACCGCG CCGCCGAGCG CTTCCTGTAC
GAGGCCGTGG TCCTGGCCGA GATCCAGCAT CCCGGCATCG TGCGCTACGT GGCCCACGGC
ACCACCGACG CGGGCGCGCC CTATCTGGCC ATGGAGTGGC TCGAGGGCGA GGATCTGTCG
AATTACCTGC GCCGCCAGCG GCGCGAGCGC AGCTCGCCGA GCACGCCGCT GCCCGAGCCC
ACGCCGCCCA GCTCGCCCGC GGCCGGCAGC TCGCCCTCGC AGACCGAGAG CACCGTCGTG
CTCGGCGACG CCACCTTCAA CGACGGCGCC GCGCTGTACG CCAGCCTGGC CGAGCACGCG
CCCCAGCTCC CAGTGCCGCA GGTGTTGCAG CTCGGCCGCC GGCTGAGCTC GGCCGTCGCC
GAATTGCATC GCCGCGGCAT CGTCCACCGC GACATCAAGC CGGCCAATCT GTTCTTGCGC
GGCGGCCACC TCGATCAGGT CAAGCTGCTC GATTTCGGCA CCGTACGCCG GCATATGGTG
CAAGAGCGCA TGACCGAGCC CGGCCGCCTC ATCGGCACGC CGCACTACAT GGCGCCGGAG
CAGGCGCGCT CGGGTGGCGA CATCGGCCCG GCCACCGACG TGTGGGCCAT GGGCTGTGTG
CTCTACGAGT GCCTCACCGG CATCAAGGCC TTCGCCGGCA AAGATCTGCT GGCGGTGCTC
ACCTGCATCA TCCTCGAAGA CCCGATCCCC ATCGCCCAGC TCCGCTCGGA CGTGCCCGCG
CCGCTGTCCG AGCTGGTCGC CAAGATGCTG AGCAAGACGC CGGGCGAGCG CCCCGACAAC
GCCGACACCC TGGCCGACGC GCTGGCGGCC ATGAGCGCGG CCTGCGCGCG CGCCGACACC
GCCCGCGAGA CCTCGCTCAA TGACACCCTG CCCTCGGCGA TCGCCATCAC CGCGGCCGAG
GCCCGGGTCA CCTGCGTGCT CTTCGCCAGC GATGGCTCGC GCCGCGCGGC CACCGTTCCC
GGCGACGAGG ACGCGGCCCT GATCGAGGCC GCCGCGTCGG CGGGCGGCGA GCTGCAGCGC
CTGGCCAACG GCACCATGCT GGTCACGGTT CCGGGCCCGC GCCTGCCCAC CGACCAGGCC
GCCCGCGCCG CCCGCGCCGC CCTGGCGCTG CGCCAGACCG CGCCCTCGCT GTCCATGGTC
CTGGCTACCG GACGCGCCGA GGGCCCGCGC CAGCTCCCTC TCGGACACGT GGTCAGCAAA
GCCGGGCGCG TGCTCGAGCG GCGCGCGCCC GGGCGCATCC ACCTCGACGA GCTGGCGGCC
GCGCTGCTCG ACTCGCGCTT CCACCTCAAG CGCGATAGCC ACGGCAGCTA TCTGCACTCC
GAGCGCCAGT ACGAGGCCAC GCGCACGCTG CTCGGTCGGC CTACGCGCTG GGTGGGACGG
CAGCGCGAGC TGGCCAGCCT GATGGCCACC TTCGACGAGT GCGTGCACGA GGAGGTCGCC
CACGCGGTGC TCGTGACCGC GCCCGCCGGC ATGGGTAAAT CGCGCCTGCG CTACGAATTC
GAGCAGCATC TGCGCCAGAA CTACGACAAG TTCGAGGTCC TGCGCGGTCA GGGCGACGTG
GTCGGCGCGG GCTCGCCCTT CGTCATGATC GCGCCGGCGA TTCGCCGCCT GGCCGGCATC
CTCGAGGGCG AGCCGCTGGC GGTGCGGCAG CGCAAGTTGC ACGGACGACT GGCCGAAACC
GTCCCCCAGG TCGAACTCGA GCGCGTGGTG ATGTTCCTCG GCGAACTCAC CGGCGTGCCC
TTCCCCGAGC ACCTGCATCC CTCGCTGCCG CTGGCGCGCA AGGATCCGCT GCTGCTGGGC
CGGCTCATGG AAGAGGCGTG GCTCGACTGG CTGCTCGCCG AGTGCAATCA CCGCCCCGTG
CTGCTGCTGC TCGAGGACCT GCACTGGGGC GACCTGCCCT CGATCCGCTT CATCGAGAGC
GCGCTGCGAA AGCTCACCGA CCGGCCGTTC ATGGTGATGG CCCTGGCCCG GCCCGAGATC
CACACCGTGT TCCCGCGCCT GTGGCCGCGC GCCGACACCT ACGAGCTGCC GCTGCGGGCG
CTGTCGCGCA AGGCCAGCAC CTCGCTGGTG CGCGACGTGC TCGGCCACGA CATCGCCGAG
CACGTGGTCG AAGCCGTGGT CGAGCGCGCC GGTGGCAACG CCTTTTATCT CGAAGAGCTC
ATCCGCGCGG TCTCCGAGCA CGGCGCCGAC CACCTGCCCG ACTCCATCCT CGGCATGGTC
CAGAACCGGC TCGACGTCCT GGGCACCGAG GCCAAGCAGA TCCTGCGCGC CAGCAGTATT
TTCGGACACG TGTTCTGGCA AGGCGGTGTC GAGGCGCTGC TCGGTCCCCA CGGCGCGTAC
GAGGTCAGCG AGTGGCTCGA CGAGCTGGTC GCGCGCGAGG TGATCAGCCG CCAGCCCGAG
GCCCGCATCC CGGGCGAGGT CGAGTACAAG TTCCGGCACT CGCTGGTGCG CGACGGCGCC
TACGCCCTGC TCACCGAGGA GGATCTGCGC CTGGGCCACG CGCTGGCCGG CACCTGGCTC
GAGCAGGCCG GCGAGCAGGA CGGCCTCACG CTGGCCGAGC ACTTCATGCG CGGCGGCGAC
CCCGAGCGCG CCATCCCCTA TTTCTTGCGC GCGGGCGCGC AGGCGCTCGA GGGCAACGAC
CTCGCGGCCG TGATGAGCAG CGCCGAGCGC GCCATCGCCG CGGGCGCCAG CGGCCTCGAC
CTGGGCGCCT TGCGCAACCT GCAAGCCGTG GCCAGCTACT GGCTCAGCAA CTACCAGGCC
AGCCAGCAGC ACGGCCTGCA GGCGCTCGAG ATTCTGCCCG CGGGCGACGG CGAGTGGTTC
TCGGCCGTGG GCACCGCCAT CGTGTCGAGC GCGCGCATCG GCGATTACGC CACGCTCGAC
GACTTGCTGG CCCGGGCTCA GGACACGAAC TGCGACGCCG ACACCCTGGC CAAACAGATC
CTGTGCCTGT GCCGCGGCAC CTTCCAGCTC GTGTTCAGCT CGCGGTTCGC CCAGGCGGAC
GAATTACTCG AGACCATCAC CGCGCTGGTG GCCCAGGCCG GCGACCTCGA CCCGCTCACG
CGCGCCCAGG TGCGCCACGT CCAGGGCCTG CGCGCCGCGC ACACCGGCGA CCCCGGCACC
TGCCTGGGCC ACCTCCAGGC CGTGGTCGCC GCCTTCGAGG AGGCCGGCGA CACCCGCAAT
GTGGCGCTCG AGCGCACCAC CGTGGCCTGG TGCTGGGCCG AGCTCGGGTA TTTCGACCAC
GCGGCCGCAC TCGGCGAGCG CAACATGGAG TTCTGCCGCC AGAGCGGCAT CCAGCAGGCC
ATCACCTACG GCAAGGTCAA CCTCGGCTAC ATCCTCAGCT ACTGCGAGGG TCGCCTGCCC
GACGCCCGCC GGCTGCTGCT CGAGAGCATC GAGGAGTGCC GCCAGGTCGG CAACCCGCGT
CTCGAGGGCT GGGCGCAGGG CCACCTCACC TGGGTCAACC ACCAGGCCGG CGCCCACGAG
GCCGCCGAGC GCGGCGCCGC CCGCGCCGTC GAGCTGCTGC CCAAGTCGCC CGGGCTGCAG
GCCTGGACCA TGGCCGCGCG GGCGCGCGCG CTGCTCGCCC TGGGCCAGCC GCAGCCGGCC
ATCCAGCACG CGCGTGAGGC CATGCGGCTG CTCGACCAGC TCGGCGGCTT GCTGCAGGGC
GAGAGCCTGC CGCCGCTGGT CCTGGCCCAG GCGCTGCATG CCAGCGGCGA CCACGAGGCC
GCCATCATGG CCATCCGCGA CGCCGCCGTG CGCCTGCATC GCCGCGCCGG CCGCCTGCCC
GAGCCGGCCT GGCGCACGCA CTTCTTGGCC ATGCCGCAGA ACGCGCTCAC GCTGCAGCTC
GCGGCCGCCT GGGCCGGCTG A
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| Protein sequence | MDDPATRSGQ WLDKRFELER QVASGGMGRV FLARDHLTDQ PVAVKLLARP DNRAAERFLY
EAVVLAEIQH PGIVRYVAHG TTDAGAPYLA MEWLEGEDLS NYLRRQRRER SSPSTPLPEP
TPPSSPAAGS SPSQTESTVV LGDATFNDGA ALYASLAEHA PQLPVPQVLQ LGRRLSSAVA
ELHRRGIVHR DIKPANLFLR GGHLDQVKLL DFGTVRRHMV QERMTEPGRL IGTPHYMAPE
QARSGGDIGP ATDVWAMGCV LYECLTGIKA FAGKDLLAVL TCIILEDPIP IAQLRSDVPA
PLSELVAKML SKTPGERPDN ADTLADALAA MSAACARADT ARETSLNDTL PSAIAITAAE
ARVTCVLFAS DGSRRAATVP GDEDAALIEA AASAGGELQR LANGTMLVTV PGPRLPTDQA
ARAARAALAL RQTAPSLSMV LATGRAEGPR QLPLGHVVSK AGRVLERRAP GRIHLDELAA
ALLDSRFHLK RDSHGSYLHS ERQYEATRTL LGRPTRWVGR QRELASLMAT FDECVHEEVA
HAVLVTAPAG MGKSRLRYEF EQHLRQNYDK FEVLRGQGDV VGAGSPFVMI APAIRRLAGI
LEGEPLAVRQ RKLHGRLAET VPQVELERVV MFLGELTGVP FPEHLHPSLP LARKDPLLLG
RLMEEAWLDW LLAECNHRPV LLLLEDLHWG DLPSIRFIES ALRKLTDRPF MVMALARPEI
HTVFPRLWPR ADTYELPLRA LSRKASTSLV RDVLGHDIAE HVVEAVVERA GGNAFYLEEL
IRAVSEHGAD HLPDSILGMV QNRLDVLGTE AKQILRASSI FGHVFWQGGV EALLGPHGAY
EVSEWLDELV AREVISRQPE ARIPGEVEYK FRHSLVRDGA YALLTEEDLR LGHALAGTWL
EQAGEQDGLT LAEHFMRGGD PERAIPYFLR AGAQALEGND LAAVMSSAER AIAAGASGLD
LGALRNLQAV ASYWLSNYQA SQQHGLQALE ILPAGDGEWF SAVGTAIVSS ARIGDYATLD
DLLARAQDTN CDADTLAKQI LCLCRGTFQL VFSSRFAQAD ELLETITALV AQAGDLDPLT
RAQVRHVQGL RAAHTGDPGT CLGHLQAVVA AFEEAGDTRN VALERTTVAW CWAELGYFDH
AAALGERNME FCRQSGIQQA ITYGKVNLGY ILSYCEGRLP DARRLLLESI EECRQVGNPR
LEGWAQGHLT WVNHQAGAHE AAERGAARAV ELLPKSPGLQ AWTMAARARA LLALGQPQPA
IQHAREAMRL LDQLGGLLQG ESLPPLVLAQ ALHASGDHEA AIMAIRDAAV RLHRRAGRLP
EPAWRTHFLA MPQNALTLQL AAAWAG
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