| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1920 |
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| Symbol | |
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| ID | 8544302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 2640568 |
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| End bp | 2641980 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646386625 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003266360 |
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| Protein GI | 262195151 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.911684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCCG CGGTGGCGAT GTATGAGCTA ACGATCGGGT GGCGGTATCT GTACCGCGGC
AACCCCTCGC GCCGGCTGCT GCTGGGCGCC GGGCTCGGCT TCCTGGCGCT GCTGCTGGGC
GTGTATCTGC TGCTCAGCTC TGACGGCAGC TCGCCCGTGG GCGTGGTCGC GCTGGTCACC
GGCATGCTCA CCACCACCGC GTGCCTGATG CTGGCCTTCT TCTCGGTGCT CACCTCGGTG
TCGGGCCTGG GCGTGGTGCT CGGCGTGGCC GCGCTGACCG TCACCCTGGC GGTGGCCACG
GGCTTCCAGG AGGAGTTCCG GGCCAAGGTG CTGGGCGTCA ACGCCCACGT CATCATCATG
AAGAACACCA CCGACTTCCC CGAGTACCGC AAGGTCGAGG AGGTCGCGCG CAACATCGAT
CCCGAGGTGC GCGCGGTGCA GCCCTTCCTG TTCGAAGAGA TGCTGGCCAC CCGCGGCAAC
GGCAAGCAGT CGGGCGTGGC CATCAAGGGC GTGGACCCGG CCCGCGTCGG CCAGGTGCTC
GACCTGCAAA AGCACATCAT CGAGGGCTCG GTCGAGCCGC TGGCCGAGCA GCCGCCGCCA
GGCGAGCCCG CGGCCATCGT CATGGGCCGC GAGCTGGCGC GCAAACTCGA CGCCACGGTC
GGCGACGAGA TCACGGTGGT GGCGCCGCTG TCGAACCTGG ATCTGGACAC CTGGACGGCT
TCCGGCAGCG CGCCGCTCAC GCGCAAGTTC CGGGTCGGCG GCATCTTCTA CAGCGGCTTC
GCCGAGTACG ACCAGCGCCT GATGTACGTG TCGCTGAGCG AGGCCCAGGA GCTGCGCGGG
CAGGGCGACC GCGTGCTCGG CGTCGAGCTC AAAGTCGCCG ACGTCGAACG CGCGCGCGAG
ATCGCCGACA AGATCGAGGC CGAGCTGGGC GGCTCGCCCT ACGTGGTGCA GGACTGGTAC
GAGCTCAACC GCAACCTGTT CACCGCGCTC ACCCTGCAGA AGATCGTCCT CATCGTCATC
CTCACGCTGA TCATCATCGT CGCCACCTTC AACGTGGTCT CGAACCTCAC CATGATGGTC
ATCGACAAAA CCCGCGAGGT GGCGATCCTC AAGTCGATCG GCGCCGACTC GGCCAGCATC
GGGCGCATCT TTCAGGTGGT CGGATTGGCC ATCGGCGCGG TCGGCACCGT GCTCGGCCTG
GGCATCGGGC TCACCGTGTG CTTCGTGGTC GAGAAGTACG GCTACCGCCT CGACCCCAAG
GTGTATCTCA TCGACCACCT GCCGATCGTG GTCAAGTCGC CCGAGGTCGT GCTCATCGCC
GCCATCACCA TGGTGGTGAG CGCGGTGGCC GCGTATTTCC CCAGCGCCAA GGCCGCGGCC
CTGCACCCGG TGGAGGGCCT GCGCTACGAG TAG
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| Protein sequence | MLAAVAMYEL TIGWRYLYRG NPSRRLLLGA GLGFLALLLG VYLLLSSDGS SPVGVVALVT
GMLTTTACLM LAFFSVLTSV SGLGVVLGVA ALTVTLAVAT GFQEEFRAKV LGVNAHVIIM
KNTTDFPEYR KVEEVARNID PEVRAVQPFL FEEMLATRGN GKQSGVAIKG VDPARVGQVL
DLQKHIIEGS VEPLAEQPPP GEPAAIVMGR ELARKLDATV GDEITVVAPL SNLDLDTWTA
SGSAPLTRKF RVGGIFYSGF AEYDQRLMYV SLSEAQELRG QGDRVLGVEL KVADVERARE
IADKIEAELG GSPYVVQDWY ELNRNLFTAL TLQKIVLIVI LTLIIIVATF NVVSNLTMMV
IDKTREVAIL KSIGADSASI GRIFQVVGLA IGAVGTVLGL GIGLTVCFVV EKYGYRLDPK
VYLIDHLPIV VKSPEVVLIA AITMVVSAVA AYFPSAKAAA LHPVEGLRYE
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