| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1893 |
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| Symbol | |
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| ID | 8544275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 2602130 |
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| End bp | 2603167 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 646386598 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_003266333 |
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| Protein GI | 262195124 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACCA CGCCCTCAGC CGCGCGCGCC GGCGCCCCCG AGCCGGCCGC CCGCTTCGCC
GCCCCGCGCG CCGACCGCGC CGACAAGCTG GTCGGCGAGC ACTTCCCGGC CGCCAGCCGC
CGCCGCGTCA CCGCCCTGTT CGCCGACGGC CGCGTGCGGG TAAACGGACG CAAGGTCAAA
AAAGGCGCCA TCGTCCCGGC CGGCGCCGAG ATCGCGCTGA CCCGGCTGCC GGTCGCCGAC
GAGGAGCTGG TGCCCCAGGC CAACCACGAG CTGGTTCTCG ACCTGCTGTA CGAAGACGAC
GCGATCGCGG TGGTGAGCAA ACCGGCCGGG CTGCCCAGCC ATCCGCTGCG CGCGGGCGAG
CGCGACACCC TGGCCAACGC CCTGGTCGCC CACTACCCGG AGTGCGCCGC GATCGGCGCC
GACCCGCGCG AGGCCGGGCT GGCGCACAGG CTCGACATCG ACACCTCCGG CGTGCTCGTG
GCCGCGCGCA CGCAGAAGGC CTGGCACGCG CTGCGCGCCG CCTTTGGCAG CGGCGCGGTG
GAGAAGCACT ACCTGGCGCT CACCTTCGGC GCGCCCAGCA GCGGCGAGAT GGATGTCGCC
CTGGTCCAGC GCGGACGCCG GGCGCACCCG GTGTTTCGCG ATGACGCAGG CTTCGGCGGA
TTCGGCGGCC GCGGAGAGCG CGGCGATGCG CTGCCCGCGC GCACCACCTG GCGCATCGAG
CGCCGCTTCG GCCCCGCGTG TCTGCTCCTG TGCCGCGCGC ACACCGGGCG CATGCATCAG
ATCCGCGTGC ACCTGGCCCT GGCCGGCGCC CCCATCATCG GCGACTCGCT GTACGCGCCC
GCGCCCGAGA CCCTGTCGGC GGCCGAGCGC GAGGACCTCG CCGCGCTCAG CGAGCACCCC
GAGGCGACGC GCCACTTCCT GCACGCCAGC GCCGTCACCA TCCCCCACCC CGAGACCGGT
CGCGCGCTGC GCATCGAGGC GCCGCTGCCC GAAGGCCGCG CGCAGTTTCT CGCCGAGCTG
TCCCGGCGCT GGCCCTGA
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| Protein sequence | MDTTPSAARA GAPEPAARFA APRADRADKL VGEHFPAASR RRVTALFADG RVRVNGRKVK
KGAIVPAGAE IALTRLPVAD EELVPQANHE LVLDLLYEDD AIAVVSKPAG LPSHPLRAGE
RDTLANALVA HYPECAAIGA DPREAGLAHR LDIDTSGVLV AARTQKAWHA LRAAFGSGAV
EKHYLALTFG APSSGEMDVA LVQRGRRAHP VFRDDAGFGG FGGRGERGDA LPARTTWRIE
RRFGPACLLL CRAHTGRMHQ IRVHLALAGA PIIGDSLYAP APETLSAAER EDLAALSEHP
EATRHFLHAS AVTIPHPETG RALRIEAPLP EGRAQFLAEL SRRWP
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